RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 KLK11Q9UBX7 282 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 CLEC4AQ9UMR7 237 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 NPIPA1Q9UND3 350 aa11.53□□□□□ -0.56
CPNE1-201ENST00000317677 TRBV2A0A0J9YWF9 115 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 TMEM272A0A1B0GTI8 110 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 A0A1W2PPK0 400 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 A6NIZ1 184 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 ACOD1A6NK06 481 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 RPP14O95059 124 aaKnown RBP11.52□□□□□ -0.56
CPNE1-201ENST00000317677 RFPL3SP0C7P2 107 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 PAX1P15863 534 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 HIST1H1BP16401 226 aaKnown RBP11.52□□□□□ -0.56
CPNE1-201ENST00000317677 ZNF14P17017 642 aaPredicted RBP11.52□□□□□ -0.56
CPNE1-201ENST00000317677 DAP3P51398 398 aaKnown RBP11.52□□□□□ -0.56
CPNE1-201ENST00000317677 AKR1C2P52895 323 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 BIDP55957 195 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 RAP1BP61224 184 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 RAP1AP62834 184 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 NAAAQ02083 359 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 AKR1C1Q04828 323 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 LPCAT3Q6P1A2 487 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 ZNF248Q8NDW4 579 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 OR10H5Q8NGA6 315 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 OR4A4PQ8NGN8 299 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 RAB40AQ8WXH6 277 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 PHYHIPQ92561 330 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 NKD1Q969G9 470 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 MIB2Q96AX9 1013 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 C14orf79Q96F83 325 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 ZNF75AQ96N20 296 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 ZNF471Q9BX82 626 aaPredicted RBP11.52□□□□□ -0.56
CPNE1-201ENST00000317677 MRPL13Q9BYD1 178 aaKnown RBP11.52□□□□□ -0.56
CPNE1-201ENST00000317677 GFOD1Q9NXC2 390 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 LAMP5Q9UJQ1 280 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 TP53TG5Q9Y2B4 290 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 HDGFL3Q9Y3E1 203 aa11.52□□□□□ -0.56
CPNE1-201ENST00000317677 PIN1P1O15428 100 aa11.52□□□□□ -0.57
CPNE1-201ENST00000317677 ZFPL1O95159 310 aa11.52□□□□□ -0.57
CPNE1-201ENST00000317677 F12P00748 615 aaPredicted RBP11.52□□□□□ -0.57
CPNE1-201ENST00000317677 HOXB5P09067 269 aa11.52□□□□□ -0.57
CPNE1-201ENST00000317677 RAB4AP20338 218 aa11.52□□□□□ -0.57
CPNE1-201ENST00000317677 HOXA5P20719 270 aa11.52□□□□□ -0.57
CPNE1-201ENST00000317677 SRSF3P84103 164 aaKnown RBP11.52□□□□□ -0.57
CPNE1-201ENST00000317677 HGFACQ04756 655 aa11.52□□□□□ -0.57
CPNE1-201ENST00000317677 DRAM2Q6UX65 266 aa11.52□□□□□ -0.57
CPNE1-201ENST00000317677 UNQ9370/PRO34162Q6UXP9 181 aa11.52□□□□□ -0.57
CPNE1-201ENST00000317677 TMPPEQ6ZT21 453 aa11.52□□□□□ -0.57
CPNE1-201ENST00000317677 SYT9Q86SS6 491 aa11.52□□□□□ -0.57
CPNE1-201ENST00000317677 SLC26A10Q8NG04 563 aa11.52□□□□□ -0.57
CPNE1-201ENST00000317677 RNF141Q8WVD5 230 aa11.52□□□□□ -0.57
CPNE1-201ENST00000317677 OR14A2Q96R54 314 aa11.52□□□□□ -0.57
CPNE1-201ENST00000317677 VRK1Q99986 396 aaPredicted RBP11.52□□□□□ -0.57
CPNE1-201ENST00000317677 NAA11Q9BSU3 229 aaPredicted RBP11.52□□□□□ -0.57
CPNE1-201ENST00000317677 MYOZ1Q9NP98 299 aaPredicted RBP11.52□□□□□ -0.57
CPNE1-201ENST00000317677 TREM1Q9NP99 234 aa11.52□□□□□ -0.57
CPNE1-201ENST00000317677 FRRS1LQ9P0K9 344 aa11.52□□□□□ -0.57
CPNE1-201ENST00000317677 APC2O95996 2303 aa11.52□□□□□ -0.57
CPNE1-201ENST00000317677 FRYQ5TBA9 3013 aa11.52□□□□□ -0.57
CPNE1-201ENST00000317677 GGT3PA6NGU5 568 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 OR5H14A6NHG9 310 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 F8VVB4 439 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 F8VWA3 439 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 STMND1H3BQB6 276 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 CBR3O75828 277 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 HLA-DQA2P01906 255 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 UCHL1P09936 223 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 COX5BP10606 129 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 H3F3AP84243 136 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 TGIF1Q15583 401 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 LY6G6FQ5SQ64 297 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 RAET1LQ5VY80 246 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 C11orf87Q6NUJ2 197 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 IZUMO1Q8IYV9 350 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 SLC30A7Q8NEW0 376 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 ZNF671Q8TAW3 534 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 LGALS14Q8TCE9 139 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 TNFAIP8L1Q8WVP5 186 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 SLAMF9Q96A28 289 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 OR8B4Q96RC9 309 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 PRDM13Q9H4Q3 707 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 TAS2R8Q9NYW2 309 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 DKKL1Q9UK85 242 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 CACNA1CQ13936 2221 aa11.51□□□□□ -0.57
CPNE1-201ENST00000317677 PHF3Q92576 2039 aaKnown RBP11.51□□□□□ -0.57
CPNE1-201ENST00000317677 A0A0J9YW62 118 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 A0A1B0GTI1 187 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 AQP7P3A6NL99 342 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 NEURL1O76050 574 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 PMS2P2O95744 297 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 P04436 131 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 SPARCP09486 303 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 NQO2P16083 231 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 CRABP1P29762 137 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 MAS1LP35410 378 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 KIR3DL2P43630 455 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 GABREP78334 506 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 EGR3Q06889 387 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 HMGN3Q15651 99 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 GFOD2Q3B7J2 385 aa11.5□□□□□ -0.57
CPNE1-201ENST00000317677 PLEKHN1Q494U1 663 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms