RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 SMIM19Q96E16 107 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 SLC35A4Q96G79 324 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 MFRPQ9BY79 579 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 CMC2Q9NRP2 79 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 SLCO1B1Q9Y6L6 691 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 ABHD16AO95870 558 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 RPLP1P05386 114 aaKnown RBP7.38□□□□□ -1.23
VPS41-202ENST00000310301 CHRNB4P30926 498 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 DRD3P35462 400 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 CSN1S1P47710 185 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 EDDM3BP56851 147 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 PIGPP57054 158 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 GUCA2AQ02747 115 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 LBHQ53QV2 105 aaPredicted RBP7.38□□□□□ -1.23
VPS41-202ENST00000310301 ZNF468Q5VIY5 522 aaPredicted RBP7.38□□□□□ -1.23
VPS41-202ENST00000310301 MFSD12Q6NUT3 480 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 DHRS11Q6UWP2 260 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 MAMSTRQ6ZN01 415 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 Q6ZN92 141 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 EXD3Q8N9H8 876 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 M1APQ8TC57 530 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 GPX8Q8TED1 209 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 MENTQ9BUN1 341 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 SERGEFQ9UGK8 458 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 TMEM184BQ9Y519 407 aaPredicted RBP7.38□□□□□ -1.23
VPS41-202ENST00000310301 HYAL3O43820 417 aaPredicted RBP7.38□□□□□ -1.23
VPS41-202ENST00000310301 OR2J3O76001 311 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 IL2RAP01589 272 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 RAC1P63000 192 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 EDDM3AQ14507 147 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 PLXDC2Q6UX71 529 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 BAHD1Q8TBE0 780 aaPredicted RBP7.38□□□□□ -1.23
VPS41-202ENST00000310301 FAM210BQ96KR6 192 aa7.38□□□□□ -1.23
VPS41-202ENST00000310301 BRCA1P38398 1863 aaKnown RBP7.38□□□□□ -1.23
VPS41-202ENST00000310301 IDSB3KWA1 339 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 B3GALT4O96024 378 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 EPXP11678 715 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 F2RP25116 425 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 RPL27P61353 136 aaKnown RBP7.37□□□□□ -1.23
VPS41-202ENST00000310301 SLC48A1Q6P1K1 146 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 VHLLQ6RSH7 139 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 TMEM229BQ8NBD8 167 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 SLC16A11Q8NCK7 471 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 OLIG1Q8TAK6 271 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 ORAI1Q96D31 301 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 ELOVL1Q9BW60 279 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 BARHL1Q9BZE3 327 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 hCG_1809904A0A1W2PP81 198 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 A0A1W2PR64 198 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 A0A1W2PRV1 198 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 CLDN34H7C241 214 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 HMGN4O00479 90 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 RGS13O14921 159 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 HEXAP06865 529 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 CTXN2P0C2S0 81 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 CD1CP29017 333 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 OPRM1P35372 400 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 PCBP3P57721 371 aaKnown RBP7.37□□□□□ -1.23
VPS41-202ENST00000310301 RUNX2Q13950 521 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 FAHD1Q6P587 224 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 TMEM64Q6YI46 380 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 NOSIPQ9Y314 301 aaKnown RBP7.37□□□□□ -1.23
VPS41-202ENST00000310301 CITO14578 2027 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 FAM221AA4D161 298 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 HCRTR1O43613 425 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 SUB1P53999 127 aaKnown RBP eCLIP7.37□□□□□ -1.23
VPS41-202ENST00000310301 CDK5R1Q15078 307 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 FAM209AQ5JX71 171 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 CYHR1Q6ZMK1 362 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 FA2HQ7L5A8 372 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 MARCH3Q86UD3 253 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 BCORP1Q8N888 145 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 GJC3Q8NFK1 279 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 OR10G3Q8NGC4 313 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 HGDQ93099 445 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 PHYHIPLQ96FC7 376 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 DERL3Q96Q80 235 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 SPACA5Q96QH8 159 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 CHRDL1Q9BU40 450 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 OR51B4Q9Y5P0 310 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 PLXNA1Q9UIW2 1896 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 ELOA3CA0A087WX78 387 aaPredicted RBP7.37□□□□□ -1.23
VPS41-202ENST00000310301 CRYM-AS1A6NIL9 109 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 ZNF195O14628 629 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 EPHA2P29317 976 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 ELAVL1Q15717 326 aaKnown RBP7.37□□□□□ -1.23
VPS41-202ENST00000310301 TMEM97Q5BJF2 176 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 OR11L1Q8NGX0 322 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 PLEKHB1Q9UF11 243 aaPredicted RBP7.37□□□□□ -1.23
VPS41-202ENST00000310301 IL17BQ9UHF5 180 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 PPIL1Q9Y3C6 166 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 M0QZK8 103 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 M0R082 166 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 GGCTO75223 188 aaKnown RBP7.37□□□□□ -1.23
VPS41-202ENST00000310301 OR5G3P0C626 314 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 SULT1A3P0DMM9 295 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 SULT1A4P0DMN0 295 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 BCL6P41182 706 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 FAM53BQ14153 422 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 TMEM215Q68D42 235 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms