RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 CHST5Q9GZS9 411 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 ZNF275Q9NSD4 429 aaPredicted RBP15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 DHDHQ9UQ10 334 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 CSMD1Q96PZ7 3565 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 ANKRD61A6NGH8 418 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 NCR1O76036 304 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 HPXP02790 462 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 SLC25A16P16260 332 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 FAHP16930 419 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 CELP19835 753 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 PRSS12P56730 875 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 MLLT11Q13015 90 aaPredicted RBP15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 CLEC12BQ2HXU8 276 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 DNM1P46Q6ZS02 220 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 UTS2BQ765I0 119 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 PEG10Q86TG7 708 aaKnown RBP15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 C1orf87Q8N0U7 546 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 OR5A2Q8NGI9 324 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 TSEN15Q8WW01 171 aaKnown RBP15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 PIGCQ92535 297 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 SGCDQ92629 289 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 GHSRQ92847 366 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 UFD1Q92890 307 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 ITPKCQ96DU7 683 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 NR1H4Q96RI1 486 aaPredicted RBP15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 PIMREGQ9BSJ6 248 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 FN3KRPQ9HA64 309 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 VCX3AQ9NNX9 186 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 SLC7A11Q9UPY5 501 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 PPP1R3CQ9UQK1 317 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 ARID1AO14497 2285 aa15.18■□□□□ 0.02
SSSCA1-201ENST00000309328 ZNF850A8MQ14 1090 aa15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 NDUFS7O75251 213 aa15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 HLA-DPB1P04440 258 aa15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 PSMA1P25786 263 aaKnown RBP15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 GIFP27352 417 aa15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 MAPK3P27361 379 aaPredicted RBP15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 GNG3P63215 75 aa15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 CNN3Q15417 329 aaKnown RBP15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 TRAM1Q15629 374 aa15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 XAF1Q6GPH4 301 aa15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 SERPINA12Q8IW75 414 aa15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 RDH10Q8IZV5 341 aa15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 OR5D14Q8NGL3 314 aa15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 OR11L1Q8NGX0 322 aa15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 Q8TCH9 128 aa15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 ITLN1Q8WWA0 313 aa15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 OR5P3Q8WZ94 311 aa15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 CPNE2Q96FN4 548 aaPredicted RBP15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 TIMD4Q96H15 378 aa15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 SOX7Q9BT81 388 aa15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 ACOT13Q9NPJ3 140 aa15.17■□□□□ 0.02
SSSCA1-201ENST00000309328 CLDN25C9JDP6 229 aa15.16■□□□□ 0.02
SSSCA1-201ENST00000309328 F5H5P2 479 aa15.16■□□□□ 0.02
SSSCA1-201ENST00000309328 ALX3O95076 343 aa15.16■□□□□ 0.02
SSSCA1-201ENST00000309328 FSTL3O95633 263 aa15.16■□□□□ 0.02
SSSCA1-201ENST00000309328 LALBAP00709 142 aa15.16■□□□□ 0.02
SSSCA1-201ENST00000309328 OCM2P0CE71 109 aa15.16■□□□□ 0.02
SSSCA1-201ENST00000309328 IRF2P14316 349 aa15.16■□□□□ 0.02
SSSCA1-201ENST00000309328 FAM76BQ5HYJ3 339 aa15.16■□□□□ 0.02
SSSCA1-201ENST00000309328 PLCXD3Q63HM9 321 aa15.16■□□□□ 0.02
SSSCA1-201ENST00000309328 SPNS3Q6ZMD2 512 aa15.16■□□□□ 0.02
SSSCA1-201ENST00000309328 PARP16Q8N5Y8 322 aa15.16■□□□□ 0.02
SSSCA1-201ENST00000309328 ZNF525Q8N782 197 aa15.16■□□□□ 0.02
SSSCA1-201ENST00000309328 SPSB1Q96BD6 273 aa15.16■□□□□ 0.02
SSSCA1-201ENST00000309328 PGLYRP3Q96LB9 341 aa15.16■□□□□ 0.02
SSSCA1-201ENST00000309328 GCM1Q9NP62 436 aa15.16■□□□□ 0.02
SSSCA1-201ENST00000309328 ITGB1BP2Q9UKP3 347 aa15.16■□□□□ 0.02
SSSCA1-201ENST00000309328 TEX15Q9BXT5 2789 aa15.16■□□□□ 0.02
SSSCA1-201ENST00000309328 A0A087WXM4 84 aa15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 H0YL77 283 aa15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 OCMP0CE72 109 aaPredicted RBP15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 PRKACBP22694 351 aa15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 EMX1Q04741 257 aaPredicted RBP15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 MAB21L1Q13394 359 aa15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 TPBGQ13641 420 aa15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 Q499Y3 187 aa15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 UBE2UQ5VVX9 321 aa15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 ZNF573Q86YE8 665 aa15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 SPARTQ8N0X7 666 aa15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 DNAAF1Q8NEP3 725 aa15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 C10orf105Q8TEF2 133 aa15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 RNF170Q96K19 258 aa15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 OR5M11Q96RB7 305 aa15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 MGLLQ99685 303 aa15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 ZNF696Q9H7X3 374 aa15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 TMEM106BQ9NUM4 274 aa15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 CKLFQ9UBR5 152 aa15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 SIRT4Q9Y6E7 314 aaPredicted RBP15.15■□□□□ 0.02
SSSCA1-201ENST00000309328 LRP5LA4QPB2 252 aa15.14■□□□□ 0.01
SSSCA1-201ENST00000309328 RP2O75695 350 aa15.14■□□□□ 0.01
SSSCA1-201ENST00000309328 HSMCR30P0CW71 290 aa15.14■□□□□ 0.01
SSSCA1-201ENST00000309328 CPEP16870 476 aa15.14■□□□□ 0.01
SSSCA1-201ENST00000309328 FUT6P51993 359 aa15.14■□□□□ 0.01
SSSCA1-201ENST00000309328 RIN1Q13671 783 aa15.14■□□□□ 0.01
SSSCA1-201ENST00000309328 MOB3CQ70IA8 216 aa15.14■□□□□ 0.01
SSSCA1-201ENST00000309328 OR1M1Q8NGA1 313 aa15.14■□□□□ 0.01
SSSCA1-201ENST00000309328 HPSE2Q8WWQ2 592 aa15.14■□□□□ 0.01
SSSCA1-201ENST00000309328 CCL17Q92583 94 aa15.14■□□□□ 0.01
SSSCA1-201ENST00000309328 RAB1CQ92928 201 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms