RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 OR5M11Q96RB7 305 aa18.91■□□□□ 0.62
HOXD4-201ENST00000306324 DLL4Q9NR61 685 aa18.91■□□□□ 0.62
HOXD4-201ENST00000306324 PPP1R3CQ9UQK1 317 aa18.91■□□□□ 0.62
HOXD4-201ENST00000306324 FLNAP21333 2647 aaKnown RBP18.91■□□□□ 0.62
HOXD4-201ENST00000306324 CD200P41217 278 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 MZT1Q08AG7 82 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 SPHARQ15513 63 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 DMRTC1Q5HYR2 192 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 PRAMEF6Q5VXH4 476 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 MOB3CQ70IA8 216 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 OR13C3Q8NGS6 347 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 C10orf105Q8TEF2 133 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 ITPKCQ96DU7 683 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 SMIM19Q96E16 107 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 HIST1H2AAQ96QV6 131 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 MICU1Q9BPX6 476 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 CHODLQ9H9P2 273 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 GCM1Q9NP62 436 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 ABCB9Q9NP78 766 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 ZNF275Q9NSD4 429 aaPredicted RBP18.9■□□□□ 0.62
HOXD4-201ENST00000306324 C14orf119Q9NWQ9 140 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 LSM2Q9Y333 95 aaKnown RBP18.9■□□□□ 0.62
HOXD4-201ENST00000306324 IGHV4-30-2A0A087WSY4 118 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 LOC100289279A0A1B0GTE1 492 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 NRASP01111 189 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 GRPP07492 148 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 MAP2K4P45985 399 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 CDH15P55291 814 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 HNRNPA0Q13151 305 aaKnown RBP18.9■□□□□ 0.62
HOXD4-201ENST00000306324 CLVS2Q5SYC1 327 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 PLCXD3Q63HM9 321 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 DMKNQ6E0U4 476 aaPredicted RBP18.9■□□□□ 0.62
HOXD4-201ENST00000306324 MOGAT3Q86VF5 341 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 CELF2-AS1Q8N7Q2 184 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 ZNF420Q8TAQ5 688 aaPredicted RBP18.9■□□□□ 0.62
HOXD4-201ENST00000306324 RPS4Y2Q8TD47 263 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 TSEN15Q8WW01 171 aaKnown RBP18.9■□□□□ 0.62
HOXD4-201ENST00000306324 PIMREGQ9BSJ6 248 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 RTL8AQ9BWD3 113 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 GPR173Q9NS66 373 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 UFSP2Q9NUQ7 469 aa18.9■□□□□ 0.62
HOXD4-201ENST00000306324 ZNF469Q96JG9 3925 aaPredicted RBP18.89■□□□□ 0.61
HOXD4-201ENST00000306324 TRIM64A6NGJ6 449 aa18.89■□□□□ 0.61
HOXD4-201ENST00000306324 TRIM64BA6NI03 449 aa18.89■□□□□ 0.61
HOXD4-201ENST00000306324 RP2O75695 350 aa18.89■□□□□ 0.61
HOXD4-201ENST00000306324 RPSAP08865 295 aaKnown RBP18.89■□□□□ 0.61
HOXD4-201ENST00000306324 ZNF20P17024 532 aa18.89■□□□□ 0.61
HOXD4-201ENST00000306324 CELP19835 753 aa18.89■□□□□ 0.61
HOXD4-201ENST00000306324 RBMXP38159 391 aaKnown RBP18.89■□□□□ 0.61
HOXD4-201ENST00000306324 KCTD8Q6ZWB6 473 aa18.89■□□□□ 0.61
HOXD4-201ENST00000306324 KRT74Q7RTS7 529 aa18.89■□□□□ 0.61
HOXD4-201ENST00000306324 OR5P3Q8WZ94 311 aa18.89■□□□□ 0.61
HOXD4-201ENST00000306324 GHSRQ92847 366 aa18.89■□□□□ 0.61
HOXD4-201ENST00000306324 FGGYQ96C11 551 aa18.89■□□□□ 0.61
HOXD4-201ENST00000306324 RNF170Q96K19 258 aa18.89■□□□□ 0.61
HOXD4-201ENST00000306324 NDUFS8O00217 210 aa18.88■□□□□ 0.61
HOXD4-201ENST00000306324 MPPED2Q15777 294 aa18.88■□□□□ 0.61
HOXD4-201ENST00000306324 HPSE2Q8WWQ2 592 aa18.88■□□□□ 0.61
HOXD4-201ENST00000306324 ADAT3Q96EY9 351 aaPredicted RBP18.88■□□□□ 0.61
HOXD4-201ENST00000306324 DHDHQ9UQ10 334 aa18.88■□□□□ 0.61
HOXD4-201ENST00000306324 ANKRD61A6NGH8 418 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 A6NLC8 198 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 PPIHO43447 177 aaKnown RBP18.87■□□□□ 0.61
HOXD4-201ENST00000306324 HSMCR30P0CW71 290 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 THBS2P35442 1172 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 GATA4P43694 442 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 GPM6AP51674 278 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 BDH1Q02338 343 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 ACSM1Q08AH1 577 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 CEACAM21Q3KPI0 293 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 TMEM42Q69YG0 159 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 SPNS3Q6ZMD2 512 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 GPR148Q8TDV2 347 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 RGP1Q92546 391 aaPredicted RBP18.87■□□□□ 0.61
HOXD4-201ENST00000306324 C10orf35Q96D05 121 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 BPESC1Q9GZL8 116 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 TMEM106BQ9NUM4 274 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 DCAF16Q9NXF7 216 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 LRCH1Q9Y2L9 728 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 ZNF281Q9Y2X9 895 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 CR1P17927 2039 aa18.87■□□□□ 0.61
HOXD4-201ENST00000306324 CLDN25C9JDP6 229 aa18.86■□□□□ 0.61
HOXD4-201ENST00000306324 MRPS14O60783 128 aaKnown RBP18.86■□□□□ 0.61
HOXD4-201ENST00000306324 SERPINA3P01011 423 aa18.86■□□□□ 0.61
HOXD4-201ENST00000306324 GIFP27352 417 aa18.86■□□□□ 0.61
HOXD4-201ENST00000306324 GPR6P46095 362 aaPredicted RBP18.86■□□□□ 0.61
HOXD4-201ENST00000306324 TMEM33P57088 247 aa18.86■□□□□ 0.61
HOXD4-201ENST00000306324 RIN1Q13671 783 aa18.86■□□□□ 0.61
HOXD4-201ENST00000306324 TBCEQ15813 527 aaPredicted RBP18.86■□□□□ 0.61
HOXD4-201ENST00000306324 WDR86Q86TI4 376 aa18.86■□□□□ 0.61
HOXD4-201ENST00000306324 OR1M1Q8NGA1 313 aa18.86■□□□□ 0.61
HOXD4-201ENST00000306324 PGLYRP3Q96LB9 341 aa18.86■□□□□ 0.61
HOXD4-201ENST00000306324 CHST5Q9GZS9 411 aa18.86■□□□□ 0.61
HOXD4-201ENST00000306324 FGF23Q9GZV9 251 aaPredicted RBP18.86■□□□□ 0.61
HOXD4-201ENST00000306324 FN3KRPQ9HA64 309 aa18.86■□□□□ 0.61
HOXD4-201ENST00000306324 ZNF732B4DXR9 585 aa18.85■□□□□ 0.61
HOXD4-201ENST00000306324 PLPP2O43688 288 aa18.85■□□□□ 0.61
HOXD4-201ENST00000306324 GATBO75879 557 aaKnown RBP18.85■□□□□ 0.61
HOXD4-201ENST00000306324 SLC25A16P16260 332 aa18.85■□□□□ 0.61
HOXD4-201ENST00000306324 SOX2P48431 317 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms