RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 C5orf66Q9H5L9 145 aa15.91■□□□□ 0.14
RETREG1-201ENST00000306320 RAB27BO00194 218 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 HEXAP06865 529 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 TAGLN2P37802 199 aaKnown RBP15.9■□□□□ 0.14
RETREG1-201ENST00000306320 FXYD4P59646 89 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 NKX6-1P78426 367 aaPredicted RBP15.9■□□□□ 0.14
RETREG1-201ENST00000306320 ACKR1Q16570 336 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 TMEM128Q5BJH2 165 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 TMEM244Q5VVB8 128 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 SUMF2Q8NBJ7 301 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 PMM1Q92871 262 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 C14orf144Q96I85 54 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 NUDT22Q9BRQ3 303 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 LANCL2Q9NS86 450 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 TMEM100Q9NV29 134 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 DMRT1Q9Y5R6 373 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 CDRT15L2A8MXV6 281 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 PPP1CCP36873 323 aaKnown RBP15.9■□□□□ 0.14
RETREG1-201ENST00000306320 TERB2Q8NHR7 220 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 ERGIC1Q969X5 290 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.9■□□□□ 0.14
RETREG1-201ENST00000306320 A0A1W2PPC4 97 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 WIPF3A6NGB9 483 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 F8VVB4 439 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 F8VWA3 439 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 PHYHO14832 338 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 CSTBP04080 98 aaKnown RBP15.9■□□□□ 0.14
RETREG1-201ENST00000306320 CD37P11049 281 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 NSUN5P2Q63ZY6 315 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 EXD3Q8N9H8 876 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 SMRP1Q8NCR6 262 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 RNASE11Q8TAA1 199 aaKnown RBP15.9■□□□□ 0.14
RETREG1-201ENST00000306320 PLA2G2EQ9NZK7 142 aa15.9■□□□□ 0.14
RETREG1-201ENST00000306320 NCOR1O75376 2440 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 H0YIG0 161 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 SCDO00767 359 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 SLC34A2O95436 690 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 SNRPCP09234 159 aaKnown RBP15.89■□□□□ 0.13
RETREG1-201ENST00000306320 H2BFMP0C1H6 154 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 TUBG1P23258 451 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 P2RY4P51582 365 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 EIF5AP63241 154 aaKnown RBP15.89■□□□□ 0.13
RETREG1-201ENST00000306320 HGFACQ04756 655 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 HNF4GQ14541 408 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 C10orf91Q5T1B1 145 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 TSPO2Q5TGU0 170 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 RPUSD3Q6P087 351 aaKnown RBP15.89■□□□□ 0.13
RETREG1-201ENST00000306320 SUMF1Q8NBK3 374 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 ZNF426Q9BUY5 554 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 EMC6Q9BV81 110 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 WASF3Q9UPY6 502 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 FAM186AA6NE01 2351 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 SHISA8B8ZZ34 492 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 SYT7O43581 403 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 FCGR3AP08637 254 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 RAB30Q15771 203 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 LANCL3Q6ZV70 420 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 MR1Q95460 341 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 FAM131CQ96AQ9 280 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 SLC5A7Q9GZV3 580 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 VSX1Q9NZR4 365 aaPredicted RBP15.89■□□□□ 0.13
RETREG1-201ENST00000306320 OR52A1Q9UKL2 312 aa15.89■□□□□ 0.13
RETREG1-201ENST00000306320 CCDC85CA6NKD9 419 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 PPP1R2P9O14990 202 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 CYTIPO60759 359 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 AK1P00568 194 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 CX3CR1P49238 355 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 FBXW4P57775 412 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 CHAF1BQ13112 559 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 NSDHLQ15738 373 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 AKR1C8PQ5T2L2 129 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 GLIPR1L1Q6UWM5 242 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 DPPA2Q7Z7J5 298 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 PEG10Q86TG7 708 aaKnown RBP15.88■□□□□ 0.13
RETREG1-201ENST00000306320 TREM2Q9NZC2 230 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 AHSA1O95433 338 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 CSRP1P21291 193 aaKnown RBP15.88■□□□□ 0.13
RETREG1-201ENST00000306320 UBE2KP61086 200 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 UNC119Q13432 240 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 ZNF260Q3ZCT1 412 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 OR56B1Q8NGI3 324 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 ASB13Q8WXK3 278 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 SLCO5A1Q9H2Y9 848 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 SLC5A6Q9Y289 635 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 HS3ST3A1Q9Y663 406 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 SCAF4O95104 1147 aaKnown RBP15.88■□□□□ 0.13
RETREG1-201ENST00000306320 TRGC2P03986 189 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 VSIG8P0DPA2 414 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 GPR3P46089 330 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 EFNA3P52797 238 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 PLXDC2Q6UX71 529 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 TGIF2LXQ8IUE1 241 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 ZFP62Q8NB50 900 aaPredicted RBP15.88■□□□□ 0.13
RETREG1-201ENST00000306320 SOX7Q9BT81 388 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 CLDN16Q9Y5I7 305 aa15.88■□□□□ 0.13
RETREG1-201ENST00000306320 PRRC2CQ9Y520 2896 aaKnown RBP15.88■□□□□ 0.13
RETREG1-201ENST00000306320 TGIF2-C20orf24A0A0A6YYL0 155 aa15.87■□□□□ 0.13
RETREG1-201ENST00000306320 CD1AP06126 327 aa15.87■□□□□ 0.13
RETREG1-201ENST00000306320 PET100P0DJ07 73 aa15.87■□□□□ 0.13
RETREG1-201ENST00000306320 BCKDHBP21953 392 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms