RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 MRPL15Q9P015 296 aaKnown RBP9.19□□□□□ -0.94
CLP1-201ENST00000302731 MYEF2Q9P2K5 600 aaKnown RBP9.19□□□□□ -0.94
CLP1-201ENST00000302731 TRAV6A0A075B6T7 132 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 C5orf49A4QMS7 147 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 MBD3L4A6NDZ8 208 aaPredicted RBP9.18□□□□□ -0.94
CLP1-201ENST00000302731 MBD3L3A6NE82 208 aaPredicted RBP9.18□□□□□ -0.94
CLP1-201ENST00000302731 WIPF3A6NGB9 483 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 MBD3L5A6NJ08 208 aaPredicted RBP9.18□□□□□ -0.94
CLP1-201ENST00000302731 ICMTO60725 284 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 ZNF780AO75290 641 aaPredicted RBP9.18□□□□□ -0.94
CLP1-201ENST00000302731 NDUFB6O95139 128 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 CYB5AP00167 134 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 CD74P04233 296 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 CRHP06850 196 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 GTF2F2P13984 249 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 KIR2DL2P43627 348 aaPredicted RBP9.18□□□□□ -0.94
CLP1-201ENST00000302731 VEGFCP49767 419 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 RBP2P50120 134 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 MTCP1P56278 107 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 RBMS2Q15434 407 aaKnown RBP9.18□□□□□ -0.94
CLP1-201ENST00000302731 CDNFQ49AH0 187 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 SFRP4Q6FHJ7 346 aaPredicted RBP9.18□□□□□ -0.94
CLP1-201ENST00000302731 STEAP1BQ6NZ63 245 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 ZNF584Q8IVC4 421 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 GABRG1Q8N1C3 465 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 FTMTQ8N4E7 242 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 CSNK2A3Q8NEV1 391 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 OR4C16Q8NGL9 310 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 MBD3L2Q8NHZ7 208 aaPredicted RBP9.18□□□□□ -0.94
CLP1-201ENST00000302731 BORCS8Q96FH0 119 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 POM121Q96HA1 1249 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 MED30Q96HR3 178 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 GPR137Q96N19 417 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 ZNF75AQ96N20 296 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 TRAF4Q9BUZ4 470 aaPredicted RBP9.18□□□□□ -0.94
CLP1-201ENST00000302731 GPR173Q9NS66 373 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 MCUBQ9NWR8 336 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 DKK4Q9UBT3 224 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 SLC7A11Q9UPY5 501 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 MSRB2Q9Y3D2 182 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 MED12LQ86YW9 2145 aa9.18□□□□□ -0.94
CLP1-201ENST00000302731 CEP250Q9BV73 2442 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 A0A0A6YYJ9 748 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 A0A1B0GUH1 482 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 TMEM235A6NFC5 223 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 WDR1O75083 606 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 CA11O75493 328 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 CRTAPO75718 401 aaPredicted RBP9.17□□□□□ -0.94
CLP1-201ENST00000302731 WISP2O76076 250 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 CST4P01036 141 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 PDGFAP04085 211 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 TBPP20226 339 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 COX5AP20674 150 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 IGHV1-2P23083 117 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 CPT2P23786 658 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 ATP1B3P54709 279 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 GK2Q14410 553 aaPredicted RBP9.17□□□□□ -0.94
CLP1-201ENST00000302731 ZMYND11Q15326 602 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 LINC00303Q3SY05 128 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 SLC22A6Q4U2R8 563 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 HIKESHIQ53FT3 197 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 KRTCAP3Q53RY4 240 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 ATAD3CQ5T2N8 411 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 RTL6Q6ICC9 239 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 INO80CQ6PI98 192 aaPredicted RBP9.17□□□□□ -0.94
CLP1-201ENST00000302731 SPACA3Q8IXA5 215 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 TCTE3Q8IZS6 198 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 C9orf106Q8NAJ2 232 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 CHST4Q8NCG5 386 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 PXT1Q8NFP0 134 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 OR5L1Q8NGL2 311 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 NPRL2Q8WTW4 380 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 RAB3CQ96E17 227 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 MRPS24Q96EL2 167 aaKnown RBP9.17□□□□□ -0.94
CLP1-201ENST00000302731 GAL3ST1Q99999 423 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 SELENOIQ9C0D9 397 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 PLSCR4Q9NRQ2 329 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 IL36GQ9NZH8 169 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 ANAPC10Q9UM13 185 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 ING4Q9UNL4 249 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 LHX6Q9UPM6 363 aa9.17□□□□□ -0.94
CLP1-201ENST00000302731 A0A0A6YYD4 124 aa9.16□□□□□ -0.94
CLP1-201ENST00000302731 FOXI3A8MTJ6 420 aaPredicted RBP9.16□□□□□ -0.94
CLP1-201ENST00000302731 ZNF736B4DX44 427 aaPredicted RBP9.16□□□□□ -0.94
CLP1-201ENST00000302731 MFNGO00587 321 aa9.16□□□□□ -0.94
CLP1-201ENST00000302731 CD3DP04234 171 aa9.16□□□□□ -0.94
CLP1-201ENST00000302731 IL5P05113 134 aa9.16□□□□□ -0.94
CLP1-201ENST00000302731 HIST1H1DP16402 221 aaKnown RBP9.16□□□□□ -0.94
CLP1-201ENST00000302731 MGMTP16455 207 aa9.16□□□□□ -0.94
CLP1-201ENST00000302731 CCNOP22674 350 aa9.16□□□□□ -0.94
CLP1-201ENST00000302731 MPZP25189 248 aa9.16□□□□□ -0.94
CLP1-201ENST00000302731 CBX5P45973 191 aa9.16□□□□□ -0.94
CLP1-201ENST00000302731 UBE2NP61088 152 aaKnown RBP9.16□□□□□ -0.94
CLP1-201ENST00000302731 MEF2DQ14814 521 aa9.16□□□□□ -0.94
CLP1-201ENST00000302731 PPA1Q15181 289 aa9.16□□□□□ -0.94
CLP1-201ENST00000302731 GABRA6Q16445 453 aa9.16□□□□□ -0.94
CLP1-201ENST00000302731 TBC1D28Q2M2D7 210 aa9.16□□□□□ -0.94
CLP1-201ENST00000302731 METTL11BQ5VVY1 283 aa9.16□□□□□ -0.94
CLP1-201ENST00000302731 CD276Q5ZPR3 534 aa9.16□□□□□ -0.94
CLP1-201ENST00000302731 ZNF782Q6ZMW2 699 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms