RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 BORCS7-ASMTA0A0B4J1R7 106 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 A0A1B0GX30 115 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 CLDN4O14493 209 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 HIST1H1BP16401 226 aaKnown RBP11.53□□□□□ -0.56
TVP23A-201ENST00000299866 GPM6BQ13491 265 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 SSX2Q16385 188 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 SGCBQ16585 318 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 PLXDC2Q6UX71 529 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 OR51E1Q8TCB6 317 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 ADAM19Q9H013 955 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 VSX1Q9NZR4 365 aaPredicted RBP11.53□□□□□ -0.56
TVP23A-201ENST00000299866 OSGIN2Q9Y236 505 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 RFNGQ9Y644 331 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 A0A0J9YY10 115 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 LINC01553A4QN01 128 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 ZNF878C9JN71 531 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 SLC31A2O15432 143 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 ADH1BP00325 375 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 F10P00742 488 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 IFNA21P01568 189 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 SOD3P08294 240 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 HCKP08631 526 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 GSTP1P09211 210 aaKnown RBP11.52□□□□□ -0.56
TVP23A-201ENST00000299866 IL11P20809 199 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 PCK2Q16822 640 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 SP6Q3SY56 376 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 KLHL24Q6TFL4 600 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 TMEM156Q8N614 296 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 COMMD1Q8N668 190 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 AVL9Q8NBF6 648 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 RSC1A1Q92681 617 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 NTNG2Q96CW9 530 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 MUCL1Q96DR8 90 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 OR8D2Q9GZM6 311 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 NELFAQ9H3P2 528 aa11.52□□□□□ -0.56
TVP23A-201ENST00000299866 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.52□□□□□ -0.56
TVP23A-201ENST00000299866 GON4LQ3T8J9 2241 aa11.52□□□□□ -0.57
TVP23A-201ENST00000299866 IGKV1D-43A0A0B4J1Z2 117 aa11.52□□□□□ -0.57
TVP23A-201ENST00000299866 BTBD17A6NE02 478 aa11.52□□□□□ -0.57
TVP23A-201ENST00000299866 FIGNL2A6NMB9 653 aa11.52□□□□□ -0.57
TVP23A-201ENST00000299866 A8MVM7 634 aa11.52□□□□□ -0.57
TVP23A-201ENST00000299866 CDC14BO60729 498 aa11.52□□□□□ -0.57
TVP23A-201ENST00000299866 IFI6P09912 130 aa11.52□□□□□ -0.57
TVP23A-201ENST00000299866 FABP4P15090 132 aa11.52□□□□□ -0.57
TVP23A-201ENST00000299866 KLK2P20151 261 aa11.52□□□□□ -0.57
TVP23A-201ENST00000299866 CRABP1P29762 137 aa11.52□□□□□ -0.57
TVP23A-201ENST00000299866 DDTP30046 118 aa11.52□□□□□ -0.57
TVP23A-201ENST00000299866 REC114Q7Z4M0 266 aa11.52□□□□□ -0.57
TVP23A-201ENST00000299866 GPR119Q8TDV5 335 aa11.52□□□□□ -0.57
TVP23A-201ENST00000299866 Q8WTZ3 238 aa11.52□□□□□ -0.57
TVP23A-201ENST00000299866 TOX2Q96NM4 488 aa11.52□□□□□ -0.57
TVP23A-201ENST00000299866 PBOV1Q9GZY1 135 aa11.52□□□□□ -0.57
TVP23A-201ENST00000299866 SMOC1Q9H4F8 434 aa11.52□□□□□ -0.57
TVP23A-201ENST00000299866 ZNF701Q9NV72 531 aaPredicted RBP11.52□□□□□ -0.57
TVP23A-201ENST00000299866 C17orf105B2RV13 164 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 PPP1R2P9O14990 202 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 ACY1Q03154 408 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 CHRFAM7AQ494W8 412 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 C19orf47Q8N9M1 422 aaKnown RBP11.51□□□□□ -0.57
TVP23A-201ENST00000299866 SLC26A10Q8NG04 563 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 RTTNQ86VV8 2226 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 TGIF2-C20orf24A0A0A6YYL0 155 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 GP1BBP13224 206 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 RGS19P49795 217 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 UBE2KP61086 200 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 FOXK1P85037 733 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 FUT7Q11130 342 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 C4orf17Q53FE4 359 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 KHDC3LQ587J8 217 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 LHFPL1Q86WI0 220 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 OR51T1Q8NGJ9 327 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 RNASE11Q8TAA1 199 aaKnown RBP11.51□□□□□ -0.57
TVP23A-201ENST00000299866 NPRL2Q8WTW4 380 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 EMG1Q92979 244 aaKnown RBP11.51□□□□□ -0.57
TVP23A-201ENST00000299866 RAB39BQ96DA2 213 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 TCTN2Q96GX1 697 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 SDHAF3Q9NRP4 125 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 SRPK3Q9UPE1 567 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 CEACAM18A8MTB9 384 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 SEC14L6B5MCN3 397 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 ATXN7O15265 892 aaPredicted RBP11.51□□□□□ -0.57
TVP23A-201ENST00000299866 CYB5BO43169 146 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 HIST1H2BKO60814 126 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 ZNF205O95201 554 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 TRGC2P03986 189 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 HIST1H2BJP06899 126 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 HEXBP07686 556 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 SEC11BP0C7V7 166 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 HIST1H2BOP23527 126 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 HIST1H2BBP33778 126 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 GJA4P35212 333 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 HIST1H2BDP58876 126 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 HIST1H2BCP62807 126 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 NKX6-1P78426 367 aaPredicted RBP11.51□□□□□ -0.57
TVP23A-201ENST00000299866 CCL20P78556 96 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 USF2Q15853 346 aaPredicted RBP11.51□□□□□ -0.57
TVP23A-201ENST00000299866 HIST2H2BEQ16778 126 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.51□□□□□ -0.57
TVP23A-201ENST00000299866 CDCP2Q5VXM1 449 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 OOSP2Q86WS3 158 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms