RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 KCNN3Q9UGI6 736 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 UBQLN2Q9UHD9 624 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 A0A1B0GUH1 482 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 RAB27BO00194 218 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 SP9P0CG40 484 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 NR2C1P13056 603 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 H2BFSP57053 126 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 PMP22Q01453 160 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 IGFBP7Q16270 282 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 SLC25A47Q6Q0C1 308 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 DOK3Q7L591 496 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 P4HA3Q7Z4N8 544 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 TUSC5Q8IXB3 177 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 NKAIN3Q8N8D7 197 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 ADAD2Q8NCV1 583 aaKnown RBP8.17□□□□□ -1.1
PRDM9-201ENST00000296682 REEP6Q96HR9 211 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 TAAR9Q96RI9 348 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 FOXB1Q99853 325 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 ANGPTL4Q9BY76 406 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 BOKQ9UMX3 212 aaPredicted RBP8.17□□□□□ -1.1
PRDM9-201ENST00000296682 COL6A6A6NMZ7 2263 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 C5orf49A4QMS7 147 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 F5H0A9 414 aaPredicted RBP8.17□□□□□ -1.1
PRDM9-201ENST00000296682 MTRF1O75570 445 aaKnown RBP8.17□□□□□ -1.1
PRDM9-201ENST00000296682 PPP1R1AQ13522 171 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 ZNF239Q16600 458 aaKnown RBP8.17□□□□□ -1.1
PRDM9-201ENST00000296682 TSPO2Q5TGU0 170 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 RAB12Q6IQ22 244 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 FAM166AQ6J272 317 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 FAM180AQ6UWF9 173 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 TEX261Q6UWH6 196 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 C3P1Q6ZMU1 363 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 COMMD7Q86VX2 200 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 OR5AS1Q8N127 324 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 CNEP1R1Q8N9A8 125 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 UBALD1Q8TB05 177 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 PAQR8Q8TEZ7 354 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 FAAP24Q9BTP7 215 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 B4GALT7Q9UBV7 327 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 U3KQ87 197 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 KIAA1549Q9HCM3 1950 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 IGLV3-32A0A0A0MS00 114 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 C9orf172C9J069 976 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 FOXG1P55316 489 aaPredicted RBP8.16□□□□□ -1.1
PRDM9-201ENST00000296682 DHRS2Q13268 280 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 SSPNQ14714 243 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 DEGS2Q6QHC5 323 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 OR2V1Q8NHB1 315 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 M1APQ8TC57 530 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 GPX8Q8TED1 209 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 ZNF700Q9H0M5 742 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 ZNF629Q9UEG4 869 aaPredicted RBP8.16□□□□□ -1.1
PRDM9-201ENST00000296682 NTN3O00634 580 aaPredicted RBP8.16□□□□□ -1.1
PRDM9-201ENST00000296682 C4BPBP20851 252 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 PTGS2P35354 604 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 PER3P56645 1201 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 GRB2P62993 217 aaKnown RBP8.16□□□□□ -1.1
PRDM9-201ENST00000296682 TRA2AQ13595 282 aaKnown RBP eCLIP8.16□□□□□ -1.1
PRDM9-201ENST00000296682 UBE2V2Q15819 145 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 SPIN3Q5JUX0 258 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 ATPAF1Q5TC12 328 aaPredicted RBP8.16□□□□□ -1.1
PRDM9-201ENST00000296682 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.16□□□□□ -1.1
PRDM9-201ENST00000296682 SEMA6DQ8NFY4 1073 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 THAP6Q8TBB0 222 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 A0A1B0GTI1 187 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 OR2AT4A6NND4 320 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 RP2O75695 350 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 DKK1O94907 266 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 VAMP5O95183 116 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 SERPINA7P05543 415 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 GLRA1P23415 457 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 NTF4P34130 210 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 PTGFRP43088 359 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 RAC3P60763 192 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 RAP2BP61225 183 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 ARF1P84077 181 aaKnown RBP8.16□□□□□ -1.1
PRDM9-201ENST00000296682 SRSF6Q13247 344 aaKnown RBP8.16□□□□□ -1.1
PRDM9-201ENST00000296682 SP6Q3SY56 376 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 SLC25A53Q5H9E4 307 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 ZNF767PQ75MW2 155 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 NAXDQ8IW45 347 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 OR5M9Q8NGP3 310 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 FGFBP3Q8TAT2 258 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 BCL2L14Q9BZR8 327 aa8.16□□□□□ -1.1
PRDM9-201ENST00000296682 ZSCAN5BA6NJL1 495 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 LGALS8O00214 317 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 ADAP1O75689 374 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 MELTFP08582 738 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 PPP3CBP16298 524 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 PPIAP62937 165 aaKnown RBP8.15□□□□□ -1.1
PRDM9-201ENST00000296682 DHODHQ02127 395 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 HLXQ14774 488 aaPredicted RBP8.15□□□□□ -1.1
PRDM9-201ENST00000296682 STK11Q15831 433 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 PABPC1L2AQ5JQF8 200 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 ZNF626Q68DY1 528 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 SULF2Q8IWU5 870 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 PAQR4Q8N4S7 273 aaPredicted RBP8.15□□□□□ -1.1
PRDM9-201ENST00000296682 PRRT1Q99946 306 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 SLC26A1Q9H2B4 701 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 PTTG3PQ9NZH4 202 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms