RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 ZBTB25P24278 435 aa20.95■□□□□ 0.94
TRIM54-201ENST00000296098 PDSS1Q5T2R2 415 aa20.95■□□□□ 0.94
TRIM54-201ENST00000296098 RIPPLY2Q5TAB7 128 aa20.95■□□□□ 0.94
TRIM54-201ENST00000296098 C1QL2Q7Z5L3 287 aa20.95■□□□□ 0.94
TRIM54-201ENST00000296098 OR5M8Q8NGP6 311 aa20.95■□□□□ 0.94
TRIM54-201ENST00000296098 PIGTQ969N2 578 aa20.95■□□□□ 0.94
TRIM54-201ENST00000296098 ZNF845Q96IR2 970 aaPredicted RBP20.95■□□□□ 0.94
TRIM54-201ENST00000296098 FOXB1Q99853 325 aa20.95■□□□□ 0.94
TRIM54-201ENST00000296098 DHRS7CA6NNS2 312 aa20.95■□□□□ 0.94
TRIM54-201ENST00000296098 CDX4O14627 284 aaPredicted RBP20.95■□□□□ 0.94
TRIM54-201ENST00000296098 NEURL1O76050 574 aa20.95■□□□□ 0.94
TRIM54-201ENST00000296098 ZNF32P17041 273 aa20.95■□□□□ 0.94
TRIM54-201ENST00000296098 S100A11P31949 105 aa20.95■□□□□ 0.94
TRIM54-201ENST00000296098 SORDQ00796 357 aa20.95■□□□□ 0.94
TRIM54-201ENST00000296098 GK2Q14410 553 aaPredicted RBP20.95■□□□□ 0.94
TRIM54-201ENST00000296098 RSPO4Q2I0M5 234 aaPredicted RBP20.95■□□□□ 0.94
TRIM54-201ENST00000296098 LPCAT3Q6P1A2 487 aa20.95■□□□□ 0.94
TRIM54-201ENST00000296098 SEMA6DQ8NFY4 1073 aa20.95■□□□□ 0.94
TRIM54-201ENST00000296098 OR2M7Q8NG81 312 aa20.95■□□□□ 0.94
TRIM54-201ENST00000296098 S100A13Q99584 98 aa20.95■□□□□ 0.94
TRIM54-201ENST00000296098 KCNN3Q9UGI6 736 aa20.95■□□□□ 0.94
TRIM54-201ENST00000296098 OR6C6A6NF89 314 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 LINC01387J3KSC0 135 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 TERTO14746 1132 aaKnown RBP20.94■□□□□ 0.94
TRIM54-201ENST00000296098 CBX5P45973 191 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 HGFACQ04756 655 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 PPP1R1AQ13522 171 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 MICBQ29980 383 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 CEACAM16Q2WEN9 425 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 ESCO2Q56NI9 601 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 OR2AE1Q8NHA4 323 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 ABHD3Q8WU67 409 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 ZNF703Q9H7S9 590 aaPredicted RBP20.94■□□□□ 0.94
TRIM54-201ENST00000296098 ABI3Q9P2A4 366 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 B4GALT7Q9UBV7 327 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 AUP1Q9Y679 476 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 MT-CO3P00414 261 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 IL2RAP01589 272 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 PPP3CBP16298 524 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 SERPINA2P20848 420 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 FAHD2BQ6P2I3 314 aaPredicted RBP20.94■□□□□ 0.94
TRIM54-201ENST00000296098 C3P1Q6ZMU1 363 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 TMUB2Q71RG4 321 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 SLC16A14Q7RTX9 510 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 FAHD2AQ96GK7 314 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 REEP6Q96HR9 211 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 SIGLEC12Q96PQ1 595 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 OCSTAMPQ9BR26 566 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 GPR35Q9HC97 309 aa20.94■□□□□ 0.94
TRIM54-201ENST00000296098 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.94■□□□□ 0.94
TRIM54-201ENST00000296098 FOXI3A8MTJ6 420 aaPredicted RBP20.93■□□□□ 0.94
TRIM54-201ENST00000296098 HTR5AP47898 357 aa20.93■□□□□ 0.94
TRIM54-201ENST00000296098 RAB14P61106 215 aa20.93■□□□□ 0.94
TRIM54-201ENST00000296098 ARFRP1Q13795 201 aa20.93■□□□□ 0.94
TRIM54-201ENST00000296098 VAX1Q5SQQ9 334 aa20.93■□□□□ 0.94
TRIM54-201ENST00000296098 LIN54Q6MZP7 749 aa20.93■□□□□ 0.94
TRIM54-201ENST00000296098 OR10K1Q8NGX5 313 aa20.93■□□□□ 0.94
TRIM54-201ENST00000296098 AKR7LQ8NHP1 331 aa20.93■□□□□ 0.94
TRIM54-201ENST00000296098 RFPL4AA6NLU0 287 aa20.92■□□□□ 0.94
TRIM54-201ENST00000296098 RFPL4AL1F8VTS6 287 aa20.92■□□□□ 0.94
TRIM54-201ENST00000296098 RP2O75695 350 aa20.92■□□□□ 0.94
TRIM54-201ENST00000296098 KRTAP27-1Q3LI81 207 aa20.92■□□□□ 0.94
TRIM54-201ENST00000296098 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.92■□□□□ 0.94
TRIM54-201ENST00000296098 HOGA1Q86XE5 327 aa20.92■□□□□ 0.94
TRIM54-201ENST00000296098 TMEM45BQ96B21 275 aa20.92■□□□□ 0.94
TRIM54-201ENST00000296098 GPR173Q9NS66 373 aa20.92■□□□□ 0.94
TRIM54-201ENST00000296098 TIMM10BQ9Y5J6 103 aa20.92■□□□□ 0.94
TRIM54-201ENST00000296098 C9orf170A2RU37 121 aa20.92■□□□□ 0.94
TRIM54-201ENST00000296098 PATE4P0C8F1 98 aa20.92■□□□□ 0.94
TRIM54-201ENST00000296098 ACKR3P25106 362 aa20.92■□□□□ 0.94
TRIM54-201ENST00000296098 PCBD1P61457 104 aa20.92■□□□□ 0.94
TRIM54-201ENST00000296098 HLXQ14774 488 aaPredicted RBP20.92■□□□□ 0.94
TRIM54-201ENST00000296098 ARRDC1Q8N5I2 433 aa20.92■□□□□ 0.94
TRIM54-201ENST00000296098 SPSB1Q96BD6 273 aa20.92■□□□□ 0.94
TRIM54-201ENST00000296098 TM2D1Q9BX74 207 aa20.92■□□□□ 0.94
TRIM54-201ENST00000296098 OR2H1Q9GZK4 316 aa20.92■□□□□ 0.94
TRIM54-201ENST00000296098 ARL6Q9H0F7 186 aa20.92■□□□□ 0.94
TRIM54-201ENST00000296098 FN3KRPQ9HA64 309 aa20.92■□□□□ 0.94
TRIM54-201ENST00000296098 ELL3Q9HB65 397 aaPredicted RBP20.92■□□□□ 0.94
TRIM54-201ENST00000296098 CD8AP01732 235 aa20.91■□□□□ 0.94
TRIM54-201ENST00000296098 LCATP04180 440 aa20.91■□□□□ 0.94
TRIM54-201ENST00000296098 RPA2P15927 270 aa20.91■□□□□ 0.94
TRIM54-201ENST00000296098 CPT2P23786 658 aa20.91■□□□□ 0.94
TRIM54-201ENST00000296098 ITGA3P26006 1051 aa20.91■□□□□ 0.94
TRIM54-201ENST00000296098 BLVRBP30043 206 aaPredicted RBP20.91■□□□□ 0.94
TRIM54-201ENST00000296098 RFC3P40938 356 aa20.91■□□□□ 0.94
TRIM54-201ENST00000296098 PSG4Q00888 419 aa20.91■□□□□ 0.94
TRIM54-201ENST00000296098 SRSF4Q08170 494 aaKnown RBP20.91■□□□□ 0.94
TRIM54-201ENST00000296098 DCAF10Q5QP82 559 aa20.91■□□□□ 0.94
TRIM54-201ENST00000296098 MITD1Q8WV92 249 aa20.91■□□□□ 0.94
TRIM54-201ENST00000296098 FBXW5Q969U6 566 aa20.91■□□□□ 0.94
TRIM54-201ENST00000296098 CYYR1Q96J86 154 aa20.91■□□□□ 0.94
TRIM54-201ENST00000296098 PHB2Q99623 299 aa20.91■□□□□ 0.94
TRIM54-201ENST00000296098 CNTRLQ7Z7A1 2325 aa20.91■□□□□ 0.94
TRIM54-201ENST00000296098 TRAV14DV4A0A0A6YYC5 116 aa20.9■□□□□ 0.94
TRIM54-201ENST00000296098 HPNP05981 417 aa20.9■□□□□ 0.94
TRIM54-201ENST00000296098 TAS2R31P59538 309 aa20.9■□□□□ 0.94
TRIM54-201ENST00000296098 IL13RA1P78552 427 aa20.9■□□□□ 0.94
TRIM54-201ENST00000296098 OR1C1Q15619 314 aa20.9■□□□□ 0.94
TRIM54-201ENST00000296098 GALNTL5Q7Z4T8 443 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms