RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 FAM189A1O60320 539 aa11.23□□□□□ -0.61
SLX4-201ENST00000294008 KIR3DL2P43630 455 aa11.23□□□□□ -0.61
SLX4-201ENST00000294008 TMEM18Q96B42 140 aa11.23□□□□□ -0.61
SLX4-201ENST00000294008 KTI12Q96EK9 354 aaPredicted RBP11.23□□□□□ -0.61
SLX4-201ENST00000294008 PIK3IP1Q96FE7 263 aa11.23□□□□□ -0.61
SLX4-201ENST00000294008 FAM210BQ96KR6 192 aa11.23□□□□□ -0.61
SLX4-201ENST00000294008 A1L4Q6 167 aa11.23□□□□□ -0.61
SLX4-201ENST00000294008 CTDSP2O14595 271 aa11.23□□□□□ -0.61
SLX4-201ENST00000294008 DEDDO75618 318 aa11.23□□□□□ -0.61
SLX4-201ENST00000294008 TMIGD3P0DMS9 266 aaPredicted RBP11.23□□□□□ -0.61
SLX4-201ENST00000294008 BCL3P20749 454 aa11.23□□□□□ -0.61
SLX4-201ENST00000294008 ETV6P41212 452 aa11.23□□□□□ -0.61
SLX4-201ENST00000294008 RFX2P48378 723 aa11.23□□□□□ -0.61
SLX4-201ENST00000294008 BTG2P78543 158 aa11.23□□□□□ -0.61
SLX4-201ENST00000294008 BAHD1Q8TBE0 780 aaPredicted RBP11.23□□□□□ -0.61
SLX4-201ENST00000294008 A0A1W2PN81 502 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 CCL21O00585 134 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 UBL3O95164 117 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 ACHEP22303 614 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 CHRNA7P36544 502 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 LFNGQ8NES3 379 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 MYOZ3Q8TDC0 251 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 CD14P08571 375 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 SLC35E2P0CK97 266 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 EBLN2Q6P2I7 272 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 ZCCHC14Q8WYQ9 949 aaKnown RBP11.22□□□□□ -0.61
SLX4-201ENST00000294008 TM4SF19Q96DZ7 209 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 ZNF426Q9BUY5 554 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 TRAT1Q6PIZ9 186 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 DYNC2LI1Q8TCX1 351 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 CCR9P51686 369 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 C20orf196Q8IYI0 205 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 ARRDC2Q8TBH0 407 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 LRRC29Q8WV35 223 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 RND1Q92730 232 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 DCTN5Q9BTE1 182 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 LIPAP38571 399 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 TCL1AP56279 114 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 COX20Q5RI15 118 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 SPANXN1Q5VSR9 72 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 GHITMQ9H3K2 345 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 ASCL3Q9NQ33 180 aa11.22□□□□□ -0.61
SLX4-201ENST00000294008 MBNL1Q9NR56 388 aaKnown RBP11.22□□□□□ -0.61
SLX4-201ENST00000294008 MED19A0JLT2 244 aaPredicted RBP11.21□□□□□ -0.61
SLX4-201ENST00000294008 PMS2P2O95744 297 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 KLF3P57682 345 aaPredicted RBP11.21□□□□□ -0.61
SLX4-201ENST00000294008 SLC17A1Q14916 467 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 CEACAM16Q2WEN9 425 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 MKRN2Q9H000 416 aaKnown RBP11.21□□□□□ -0.61
SLX4-201ENST00000294008 FSCN3Q9NQT6 498 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 ZGLP1P0C6A0 271 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 HOXD9P28356 352 aaPredicted RBP11.21□□□□□ -0.61
SLX4-201ENST00000294008 MEOX2P50222 304 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 DDB2Q92466 427 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 C1QTNF3Q9BXJ4 246 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 GLIPR2Q9H4G4 154 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 PARP11Q9NR21 331 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 KCPQ6ZWJ8 1503 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 ZNF121P58317 390 aaPredicted RBP11.21□□□□□ -0.61
SLX4-201ENST00000294008 MEIG1Q5JSS6 88 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 ZNF547Q8IVP9 402 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 OSR2Q8N2R0 312 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 OR5H6Q8NGV6 325 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 GNPNAT1Q96EK6 184 aaPredicted RBP11.21□□□□□ -0.61
SLX4-201ENST00000294008 DHRS3O75911 302 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 AOAHP28039 575 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 HRH1P35367 487 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 ELAVL1Q15717 326 aaKnown RBP11.21□□□□□ -0.61
SLX4-201ENST00000294008 HLA-BQ31612 363 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 ZNF738Q8NE65 137 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 OR4B1Q8NGF8 309 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 TMEM37Q8WXS4 190 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 SLC39A13Q96H72 371 aa11.21□□□□□ -0.61
SLX4-201ENST00000294008 DIP2BQ9P265 1576 aa11.21□□□□□ -0.62
SLX4-201ENST00000294008 TO15178 435 aa11.21□□□□□ -0.62
SLX4-201ENST00000294008 GPRIN2O60269 458 aa11.21□□□□□ -0.62
SLX4-201ENST00000294008 CD68P34810 354 aaPredicted RBP11.21□□□□□ -0.62
SLX4-201ENST00000294008 ZNF137PP52743 207 aa11.21□□□□□ -0.62
SLX4-201ENST00000294008 NUDT8Q8WV74 236 aa11.21□□□□□ -0.62
SLX4-201ENST00000294008 SFRP2Q96HF1 295 aa11.21□□□□□ -0.62
SLX4-201ENST00000294008 OR10C1Q96KK4 312 aa11.21□□□□□ -0.62
SLX4-201ENST00000294008 PCYT2Q99447 389 aa11.21□□□□□ -0.62
SLX4-201ENST00000294008 NKX6-2Q9C056 277 aaPredicted RBP11.21□□□□□ -0.62
SLX4-201ENST00000294008 ZNF552Q9H707 407 aaPredicted RBP11.21□□□□□ -0.62
SLX4-201ENST00000294008 NDUFB11Q9NX14 153 aa11.21□□□□□ -0.62
SLX4-201ENST00000294008 OOEPA6NGQ2 149 aa11.21□□□□□ -0.62
SLX4-201ENST00000294008 PRSS44E7EML9 344 aa11.21□□□□□ -0.62
SLX4-201ENST00000294008 IGKV3-20P01619 116 aa11.21□□□□□ -0.62
SLX4-201ENST00000294008 TEAD1P28347 426 aa11.21□□□□□ -0.62
SLX4-201ENST00000294008 S100A11P31949 105 aa11.21□□□□□ -0.62
SLX4-201ENST00000294008 RAB32Q13637 225 aa11.21□□□□□ -0.62
SLX4-201ENST00000294008 LY6EQ16553 131 aa11.21□□□□□ -0.62
SLX4-201ENST00000294008 NUDCD2Q8WVJ2 157 aa11.21□□□□□ -0.62
SLX4-201ENST00000294008 IL17CQ9P0M4 197 aa11.21□□□□□ -0.62
SLX4-201ENST00000294008 TRAV17A0A0B4J275 112 aa11.2□□□□□ -0.62
SLX4-201ENST00000294008 CST4P01036 141 aa11.2□□□□□ -0.62
SLX4-201ENST00000294008 OR4A47Q6IF82 309 aa11.2□□□□□ -0.62
SLX4-201ENST00000294008 TCTN3Q6NUS6 607 aa11.2□□□□□ -0.62
SLX4-201ENST00000294008 CLEC2AQ6UVW9 174 aa11.2□□□□□ -0.62
SLX4-201ENST00000294008 OR2V1Q8NHB1 315 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms