RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 AIMP2Q13155 320 aaKnown RBP16.15■□□□□ 0.18
PDLIM3-201ENST00000284767 H3F3CQ6NXT2 135 aa16.15■□□□□ 0.18
PDLIM3-201ENST00000284767 IL34Q6ZMJ4 242 aa16.15■□□□□ 0.18
PDLIM3-201ENST00000284767 OR6S1Q8NH40 331 aa16.15■□□□□ 0.18
PDLIM3-201ENST00000284767 NUDT16L1Q9BRJ7 211 aaKnown RBP16.15■□□□□ 0.18
PDLIM3-201ENST00000284767 IFT22Q9H7X7 185 aa16.15■□□□□ 0.18
PDLIM3-201ENST00000284767 DOCK10Q96BY6 2186 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 HRH1P35367 487 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 GSK3AP49840 483 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 S100A12P80511 92 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 OR52W1Q6IF63 320 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 CBLN2Q8IUK8 224 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 PAQR4Q8N4S7 273 aaPredicted RBP16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 GVQW1Q8N7I0 195 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 ADAD2Q8NCV1 583 aaKnown RBP16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 SEC11CQ9BY50 192 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 ANGPTL4Q9BY76 406 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 SPRY4Q9C004 299 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 B3GALT5Q9Y2C3 310 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 BPNT1O95861 308 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 AKR1C4P17516 323 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 DAP3P51398 398 aaKnown RBP16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 CARD17Q5XLA6 110 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 DRAM2Q6UX65 266 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 CHST4Q8NCG5 386 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 C12orf57Q99622 126 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 CNTD2Q9H8S5 307 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 SH2D2AQ9NP31 389 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 P4HTMQ9NXG6 502 aa16.14■□□□□ 0.17
PDLIM3-201ENST00000284767 MT-CO3P00414 261 aa16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 IFNA6P05013 189 aa16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 HSD11B1P28845 292 aa16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 SERPINF1P36955 418 aa16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 GPR85P60893 370 aa16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 NKAPLQ5M9Q1 402 aa16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 RAET1LQ5VY80 246 aa16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 OR1M1Q8NGA1 313 aa16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 CYTL1Q9NRR1 136 aa16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 LOC400499M0QZD8 3231 aa16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 IGHV3-15A0A0B4J1V0 119 aa16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 UNC119Q13432 240 aa16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 DEGS2Q6QHC5 323 aa16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 NUDCD2Q8WVJ2 157 aa16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 ADAT1Q9BUB4 502 aaKnown RBP16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 TLNRD1Q9H1K6 362 aa16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 ZFP57Q9NU63 452 aa16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 COA4Q9NYJ1 87 aa16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 OTOGLQ3ZCN5 2332 aa16.13■□□□□ 0.17
PDLIM3-201ENST00000284767 C13orf42A0A1B0GVH6 325 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 ZIC3O60481 467 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 HEXAP06865 529 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 ZNF806P0C7X5 589 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 LIFP15018 202 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 ZNF823P16415 610 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 QRFPP83859 136 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 MFAP5Q13361 173 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 PLEKHN1Q494U1 663 aaPredicted RBP16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 CDCP2Q5VXM1 449 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 HOGA1Q86XE5 327 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 SLC26A10Q8NG04 563 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 CMBLQ96DG6 245 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 UQCC2Q9BRT2 126 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 RNF126Q9BV68 326 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 SELENOIQ9C0D9 397 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 KLHL13Q9P2N7 655 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 PHF3Q92576 2039 aaKnown RBP16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 TMEM269A0A1B0GVZ9 245 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 SLC22A6Q4U2R8 563 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 AWAT2Q6E213 333 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 OR4A4PQ8NGN8 299 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 FN3KRPQ9HA64 309 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 TMEM9BQ9NQ34 198 aa16.12■□□□□ 0.17
PDLIM3-201ENST00000284767 A6NIZ1 184 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 LMX1BO60663 402 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 RAP1BP61224 184 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 RAP1AP62834 184 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 PJVKQ0ZLH3 352 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 SSPNQ14714 243 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 PCK2Q16822 640 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 HES3Q5TGS1 186 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 DCXRQ7Z4W1 244 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 UEVLDQ8IX04 471 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 SLC22A24Q8N4F4 322 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 ST7LQ8TDW4 575 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 LIN37Q96GY3 246 aaPredicted RBP16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 DDA1Q9BW61 102 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 ESRP2Q9H6T0 727 aaKnown RBP16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 TREM1Q9NP99 234 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 UQCC1Q9NVA1 299 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 FBLN5Q9UBX5 448 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 A0A0B4J2A0 478 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 KCNAB3O43448 404 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 TRAF3IP2O43734 574 aaPredicted RBP16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 FAM157CP0CG43 387 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 SRSF3P84103 164 aaKnown RBP16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 TMEM128Q5BJH2 165 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 DNM1P34Q6PK57 102 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 DMBX1Q8NFW5 382 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 TMED6Q8WW62 240 aa16.11■□□□□ 0.17
PDLIM3-201ENST00000284767 SHPKQ9UHJ6 478 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms