RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 TECTBQ96PL2 329 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 H0YIG0 161 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 HAAOP46952 286 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 TPPP2P59282 170 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 OXGR1Q96P68 337 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 A0A0B4J2E0 115 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 A0A1B0GX12 115 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 MPC2O95563 127 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 GPANK1O95872 356 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 AGFG1P52594 562 aaKnown RBP14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 HIST1H3AP68431 136 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 WDR38Q5JTN6 314 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 ISOC2Q96AB3 205 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 SHARPINQ9H0F6 387 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 SPRY1O43609 319 aaPredicted RBP14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 NOVA1P51513 510 aaKnown RBP14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 PPIAP62937 165 aaKnown RBP14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 IL10RAQ13651 578 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 TCTN1Q2MV58 587 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 BTNL8Q6UX41 500 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 SCCPDHQ8NBX0 429 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 CCDC74AQ96AQ1 378 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 TMPRSS13Q9BYE2 586 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 OR5V1Q9UGF6 321 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 RCL1Q9Y2P8 373 aaKnown RBP14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 PHIPQ8WWQ0 1821 aa14.8□□□□□ -0.04
SH3RF1-201ENST00000284637 ZNF891A8MT65 544 aaPredicted RBP14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 SEMG1P04279 462 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 ASCL1P50553 236 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 PNLIPRP2P54317 469 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 DUSP2Q05923 314 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 MLF2Q15773 248 aaPredicted RBP14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 ZNF600Q6ZNG1 722 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 DTWD2Q8NBA8 298 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 OR4C3Q8NH37 302 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 TEX101Q9BY14 249 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 RIMS4Q9H426 269 aaPredicted RBP14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 FAM74A7A6NL05 159 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 DVL1O14640 695 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 MBTPS2O43462 519 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 CXCL13O43927 109 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 CAPZBP47756 277 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 PCP4P48539 62 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 FAM74A3Q4VXF1 159 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 ACTR3CQ9C0K3 210 aaPredicted RBP14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 C7orf77A4D0Y5 90 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 GSTZ1O43708 216 aaPredicted RBP14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 GSK3AP49840 483 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 OR8G1Q15617 311 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 UBE3DQ7Z6J8 389 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 C11orf40Q8WZ69 217 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 MRGPRX1Q96LB2 322 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 UCK1Q9HA47 277 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 PSENENQ9NZ42 101 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 ANKRD20A5PA0PJZ0 165 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 KLRC4-KLRK1H3BQV0 150 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 FOXF1Q12946 379 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 ZDHHC22Q8N966 263 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 MFSD2BA6NFX1 497 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 CTDSPLO15194 276 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 UBE2G1P62253 170 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 INPP5JQ15735 1006 aaPredicted RBP14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 LIMS2Q7Z4I7 341 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 PACRGQ96M98 296 aaPredicted RBP14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 WSB1Q9Y6I7 421 aa14.79□□□□□ -0.04
SH3RF1-201ENST00000284637 FER1L6Q2WGJ9 1857 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 IGLV3-16A0A075B6K0 115 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 IGF2P01344 180 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 ARG1P05089 322 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 B4GALT1P15291 398 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 PPP1R1AQ13522 171 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 TMEM183BQ1AE95 376 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 TIPARPQ7Z3E1 657 aaKnown RBP14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 ARRDC1Q8N5I2 433 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 MORN4Q8NDC4 146 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 THOC3Q96J01 351 aaKnown RBP14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 PPP1R3EQ9H7J1 279 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 ADGRL4Q9HBW9 690 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 SIT1Q9Y3P8 196 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 THSD4Q6ZMP0 1018 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 OR52N4Q8NGI2 321 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 ELSPBP1Q96BH3 223 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 GHITMQ9H3K2 345 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 MMP17Q9ULZ9 603 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 PTPRZ1P23471 2315 aaPredicted RBP14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 AQP7P3A6NL99 342 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 ZNF596Q8TC21 504 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 TMEM37Q8WXS4 190 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 MMP25Q9NPA2 562 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 SLC17A4Q9Y2C5 497 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 CCDC187A0A096LP49 1063 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 FRG2CA6NGY1 282 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 HOXD4P09016 255 aaPredicted RBP14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 NDUFB7P17568 137 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 FAM53BQ14153 422 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 ARHGEF39Q8N4T4 335 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 CORO2AQ92828 525 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 RASL12Q9NYN1 266 aa14.78□□□□□ -0.04
SH3RF1-201ENST00000284637 SLX4Q8IY92 1834 aa14.77□□□□□ -0.04
SH3RF1-201ENST00000284637 DHHO43323 396 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms