RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 PLAC9Q5JTB6 97 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 GCNT2Q8N0V5 402 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 DEDD2Q8WXF8 326 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 C1orf147Q96MC9 270 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-201ENST00000279247 KCNK7Q9Y2U2 307 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 A0A0U1RQV5 110 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 TMEM14DPA8MWL7 114 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 GABRR1P24046 479 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 HRH1P35367 487 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 CXADRP78310 365 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 ZNF92Q03936 586 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 DEFB109BQ30KR1 87 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 NKAPLQ5M9Q1 402 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 RAB12Q6IQ22 244 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 DRAM2Q6UX65 266 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 RADILQ96JH8 1075 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 POFUT1Q9H488 388 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 ASCL3Q9NQ33 180 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 A0A1B0GUH1 482 aa15.63■□□□□ 0.09
CAPN1-201ENST00000279247 ZNF587BE7ETH6 402 aa15.63■□□□□ 0.09
CAPN1-201ENST00000279247 CD37P11049 281 aa15.63■□□□□ 0.09
CAPN1-201ENST00000279247 RAB6AP20340 208 aa15.63■□□□□ 0.09
CAPN1-201ENST00000279247 RNASE10Q5GAN6 216 aaKnown RBP15.63■□□□□ 0.09
CAPN1-201ENST00000279247 C11orf88Q6PI97 169 aa15.63■□□□□ 0.09
CAPN1-201ENST00000279247 OR52H1Q8NGJ2 320 aa15.63■□□□□ 0.09
CAPN1-201ENST00000279247 KCNG3Q8TAE7 436 aa15.63■□□□□ 0.09
CAPN1-201ENST00000279247 AQP3Q92482 292 aa15.63■□□□□ 0.09
CAPN1-201ENST00000279247 PIGCQ92535 297 aa15.63■□□□□ 0.09
CAPN1-201ENST00000279247 APH1AQ96BI3 265 aa15.63■□□□□ 0.09
CAPN1-201ENST00000279247 EIF3KQ9UBQ5 218 aaKnown RBP15.63■□□□□ 0.09
CAPN1-201ENST00000279247 PRSS50Q9UI38 385 aa15.63■□□□□ 0.09
CAPN1-201ENST00000279247 ZNF230Q9UIE0 474 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-201ENST00000279247 ZNF503-AS2A6NEH8 195 aa15.63■□□□□ 0.09
CAPN1-201ENST00000279247 SULT1A3P0DMM9 295 aa15.63■□□□□ 0.09
CAPN1-201ENST00000279247 SULT1A4P0DMN0 295 aa15.63■□□□□ 0.09
CAPN1-201ENST00000279247 DNASE1P24855 282 aa15.63■□□□□ 0.09
CAPN1-201ENST00000279247 SOX8P57073 446 aa15.63■□□□□ 0.09
CAPN1-201ENST00000279247 LAMTOR1Q6IAA8 161 aa15.63■□□□□ 0.09
CAPN1-201ENST00000279247 TRGV5A0A0B4J1U4 118 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 A0A1W2PR80 420 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 C5orf49A4QMS7 147 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 APOC1P02654 83 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 MGMTP16455 207 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 RAG2P55895 527 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 PDCD1Q15116 288 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 C2orf68Q2NKX9 166 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 TMEM53Q6P2H8 277 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 NLRC3Q7RTR2 1065 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 ZFAND1Q8TCF1 268 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 ST6GALNAC5Q9BVH7 336 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 ZNF436Q9C0F3 470 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-201ENST00000279247 CHST5Q9GZS9 411 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 EMC3Q9P0I2 261 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 SPRR3Q9UBC9 169 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 CDRT15L2A8MXV6 281 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 NOS1APO75052 506 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-201ENST00000279247 BLVRBP30043 206 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-201ENST00000279247 TMEM50BP56557 158 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 MUC20Q8N307 709 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-201ENST00000279247 BHLHE23Q8NDY6 225 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 GPN1Q9HCN4 374 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-201ENST00000279247 DLL4Q9NR61 685 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 ZNF581Q9P0T4 197 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 ANKRD11Q6UB99 2663 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-201ENST00000279247 RAD51DO75771 328 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 HTR3BO95264 441 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 THBS4P35443 961 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 RIPPLY2Q5TAB7 128 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 FAM109AQ8N4B1 249 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 HYLS1Q96M11 299 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 V9GYS6 101 aa15.62■□□□□ 0.09
CAPN1-201ENST00000279247 RRADP55042 308 aa15.61■□□□□ 0.09
CAPN1-201ENST00000279247 RIPPLY1Q0D2K3 151 aa15.61■□□□□ 0.09
CAPN1-201ENST00000279247 BRICD5Q6PL45 260 aa15.61■□□□□ 0.09
CAPN1-201ENST00000279247 ZFP62Q8NB50 900 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-201ENST00000279247 PARPBPQ9NWS1 579 aa15.61■□□□□ 0.09
CAPN1-201ENST00000279247 ZNF224Q9NZL3 707 aa15.61■□□□□ 0.09
CAPN1-201ENST00000279247 ARPC4-TTLL3A0A0A6YYG9 625 aa15.61■□□□□ 0.09
CAPN1-201ENST00000279247 UBE2QL1A1L167 161 aa15.61■□□□□ 0.09
CAPN1-201ENST00000279247 OR6C6A6NF89 314 aa15.61■□□□□ 0.09
CAPN1-201ENST00000279247 LINC01387J3KSC0 135 aa15.61■□□□□ 0.09
CAPN1-201ENST00000279247 SSX5O60225 188 aa15.61■□□□□ 0.09
CAPN1-201ENST00000279247 PRAF2O60831 178 aa15.61■□□□□ 0.09
CAPN1-201ENST00000279247 HIKESHIQ53FT3 197 aa15.61■□□□□ 0.09
CAPN1-201ENST00000279247 LIN54Q6MZP7 749 aa15.61■□□□□ 0.09
CAPN1-201ENST00000279247 TMEM229BQ8NBD8 167 aa15.61■□□□□ 0.09
CAPN1-201ENST00000279247 OR5M9Q8NGP3 310 aa15.61■□□□□ 0.09
CAPN1-201ENST00000279247 CST11Q9H112 138 aa15.61■□□□□ 0.09
CAPN1-201ENST00000279247 SCPEP1Q9HB40 452 aa15.61■□□□□ 0.09
CAPN1-201ENST00000279247 TNRC6AQ8NDV7 1962 aaKnown RBP15.61■□□□□ 0.09
CAPN1-201ENST00000279247 MEIKINA0A087WXM9 373 aa15.6■□□□□ 0.09
CAPN1-201ENST00000279247 TMEM82A0PJX8 343 aa15.6■□□□□ 0.09
CAPN1-201ENST00000279247 GOSR2O14653 212 aa15.6■□□□□ 0.09
CAPN1-201ENST00000279247 SNU13P55769 128 aaKnown RBP15.6■□□□□ 0.09
CAPN1-201ENST00000279247 PCBD1P61457 104 aa15.6■□□□□ 0.09
CAPN1-201ENST00000279247 HLXQ14774 488 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-201ENST00000279247 CRIP3Q6Q6R5 217 aa15.6■□□□□ 0.09
CAPN1-201ENST00000279247 PP6455Q8WZ26 134 aa15.6■□□□□ 0.09
CAPN1-201ENST00000279247 PTX4Q96A99 478 aa15.6■□□□□ 0.09
CAPN1-201ENST00000279247 SCP2D1Q9UJQ7 156 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms