RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 PRB3Q04118 309 aaPredicted RBP10.51□□□□□ -0.73
CD44-203ENST00000278386 PRDX4Q13162 271 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 KLRD1Q13241 179 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 KLHL12Q53G59 568 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 STUMQ69YW2 141 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 DHRS7BQ6IAN0 325 aaPredicted RBP10.51□□□□□ -0.73
CD44-203ENST00000278386 LCN8Q6JVE9 175 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 GDPGP1Q6ZNW5 385 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 OR5T2Q8NGG2 359 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 C12orf43Q96C57 262 aaKnown RBP10.51□□□□□ -0.73
CD44-203ENST00000278386 ITPKCQ96DU7 683 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 AMELYQ99218 206 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 NIPSNAP1Q9BPW8 284 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 MMP27Q9H306 513 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 SNTG1Q9NSN8 517 aa10.51□□□□□ -0.73
CD44-203ENST00000278386 TMEM210A6NLX4 147 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 ZNF850A8MQ14 1090 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 PRR23D1E9PI22 279 aaPredicted RBP10.5□□□□□ -0.73
CD44-203ENST00000278386 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.5□□□□□ -0.73
CD44-203ENST00000278386 SELENOFO60613 162 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 PAHP00439 452 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 PRR23D2P0DMB1 279 aaPredicted RBP10.5□□□□□ -0.73
CD44-203ENST00000278386 POU1F1P28069 291 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 DLX1P56177 255 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 GUCA2AQ02747 115 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 PRSS45Q7RTY3 260 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 PIP4P2Q8N4L2 257 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 LINC01006Q8NI28 216 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 FAM81AQ8TBF8 368 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 GIPC3Q8TF64 312 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 THEM6Q8WUY1 208 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 RPL3LQ92901 407 aaKnown RBP10.5□□□□□ -0.73
CD44-203ENST00000278386 CCDC124Q96CT7 223 aaKnown RBP10.5□□□□□ -0.73
CD44-203ENST00000278386 LRGUKQ96M69 825 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 DCTN5Q9BTE1 182 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 TLNRD1Q9H1K6 362 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 RGCCQ9H4X1 137 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 TCF7L1Q9HCS4 588 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 ABCB9Q9NP78 766 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 HAO2Q9NYQ3 351 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 TAS2R1Q9NYW7 299 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 ZNRD1Q9P1U0 126 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 ZNF319Q9P2F9 582 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 ZNF391Q9UJN7 358 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 MPC1Q9Y5U8 109 aa10.5□□□□□ -0.73
CD44-203ENST00000278386 A0A1W2PQ09 198 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 B2RBV5 119 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 NPFFO15130 113 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 GPR37O15354 613 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 AKR7A2O43488 359 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 CST1P01037 141 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 TFF1P04155 84 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 NDUFB7P17568 137 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 ACKR3P25106 362 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 KRTAP10-3P60369 221 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 RPS7P62081 194 aaKnown RBP10.49□□□□□ -0.73
CD44-203ENST00000278386 TAF9Q16594 264 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 PLBD1Q6P4A8 553 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 TIGD4Q8IY51 512 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 ZDHHC23Q8IYP9 409 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 ARHGAP24Q8N264 748 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 GALNT4Q8N4A0 578 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 LY6G5BQ8NDX9 201 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 OR10Z1Q8NGY1 313 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 OTOSQ8NHW6 89 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 PIGCQ92535 297 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 PKP2Q99959 881 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 WDR13Q9H1Z4 485 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 SLC25A10Q9UBX3 287 aaPredicted RBP10.49□□□□□ -0.73
CD44-203ENST00000278386 VPREB3Q9UKI3 123 aa10.49□□□□□ -0.73
CD44-203ENST00000278386 PRKDCP78527 4128 aaKnown RBP10.48□□□□□ -0.73
CD44-203ENST00000278386 MEIOCA2RUB1 952 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 RNASEK-C17orf49H0YIS7 233 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 GNGT2O14610 69 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 RAP2AP10114 183 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 GABRA2P47869 451 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 GPM6AP51674 278 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 PSMA6P60900 246 aaKnown RBP10.48□□□□□ -0.73
CD44-203ENST00000278386 TRIM25Q14258 630 aaKnown RBP10.48□□□□□ -0.73
CD44-203ENST00000278386 GK3PQ14409 553 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 METAP1DQ6UB28 335 aaPredicted RBP10.48□□□□□ -0.73
CD44-203ENST00000278386 CD300LDQ6UXZ3 194 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 Q6ZSV7 163 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 RHOUQ7L0Q8 258 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 PIGWQ7Z7B1 504 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 COMMD2Q86X83 199 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 ZNF454Q8N9F8 522 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 PAPD5Q8NDF8 572 aaKnown RBP10.48□□□□□ -0.73
CD44-203ENST00000278386 OR8B12Q8NGG6 310 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 NPRL2Q8WTW4 380 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 HPSE2Q8WWQ2 592 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 OR5P3Q8WZ94 311 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 NSL1Q96IY1 281 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 RNF170Q96K19 258 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 GAFA1Q96PS6 74 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 RAB3IPQ96QF0 476 aaPredicted RBP10.48□□□□□ -0.73
CD44-203ENST00000278386 HIST1H2AAQ96QV6 131 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 FEVQ99581 238 aa10.48□□□□□ -0.73
CD44-203ENST00000278386 RBM4BQ9BQ04 359 aaKnown RBP10.48□□□□□ -0.73
CD44-203ENST00000278386 DNTTIP1Q9H147 329 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms