RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 CLN5O75503 358 aa12.56□□□□□ -0.4
TNFRSF11A-201ENST00000269485 LYPD3O95274 346 aa12.56□□□□□ -0.4
TNFRSF11A-201ENST00000269485 IGKV3-11P04433 115 aa12.56□□□□□ -0.4
TNFRSF11A-201ENST00000269485 RFPL3SP0C7P2 107 aa12.56□□□□□ -0.4
TNFRSF11A-201ENST00000269485 PRF1P14222 555 aa12.56□□□□□ -0.4
TNFRSF11A-201ENST00000269485 RPS4Y1P22090 263 aaKnown RBP12.56□□□□□ -0.4
TNFRSF11A-201ENST00000269485 CD80P33681 288 aa12.56□□□□□ -0.4
TNFRSF11A-201ENST00000269485 RPS27AP62979 156 aaKnown RBP12.56□□□□□ -0.4
TNFRSF11A-201ENST00000269485 UBA52P62987 128 aaKnown RBP12.56□□□□□ -0.4
TNFRSF11A-201ENST00000269485 ETFRF1Q6IPR1 90 aa12.56□□□□□ -0.4
TNFRSF11A-201ENST00000269485 ZNF529Q6P280 563 aa12.56□□□□□ -0.4
TNFRSF11A-201ENST00000269485 TGIF2LXQ8IUE1 241 aa12.56□□□□□ -0.4
TNFRSF11A-201ENST00000269485 SPACA9Q96E40 222 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF11A-201ENST00000269485 SLC25A32Q9H2D1 315 aa12.56□□□□□ -0.4
TNFRSF11A-201ENST00000269485 SDCBPO00560 298 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 HPP00738 406 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 STAC2Q6ZMT1 411 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 PGAP1Q75T13 922 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 FAM24BQ8N5W8 94 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 ABHD3Q8WU67 409 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 FBXO4Q9UKT5 387 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 DENND4AQ7Z401 1863 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 MPTX1A8MV57 137 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 ALG1L2C9J202 215 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 ZNF878C9JN71 531 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 KLF4O43474 513 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 HLA-DQB1P01920 261 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 CELA3AP09093 270 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 CD53P19397 219 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 ACTBL2Q562R1 376 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 RTN4RL2Q86UN3 420 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 ZNF227Q86WZ6 799 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 ZNF440Q8IYI8 595 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 LAT2Q9GZY6 243 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 CRLF2Q9HC73 371 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 MED19A0JLT2 244 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 CLPSP04118 112 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 AMY2AP04746 511 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 IFNA6P05013 189 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 TMEM225BP0DP42 221 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 CSNK1A1P48729 337 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 RPL22L1Q6P5R6 122 aaKnown RBP12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 RNF144BQ7Z419 303 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 UBAC2Q8NBM4 344 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 CHST6Q9GZX3 395 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 WDR13Q9H1Z4 485 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 GSKIPQ9P0R6 139 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 URGCP-MRPS24S4R325 110 aa12.55□□□□□ -0.4
TNFRSF11A-201ENST00000269485 RBBP9O75884 186 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 KNG1P01042 644 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 FGF9P31371 208 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 SLC6A8P48029 635 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 DUSP3P51452 185 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 ARG2P78540 354 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 ZNF674Q2M3X9 581 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 STPG1Q5TH74 334 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 UNQ6494/PRO21346Q6UXR6 183 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 WDFY1Q8IWB7 410 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 ARHGEF39Q8N4T4 335 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 GVQW1Q8N7I0 195 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 OR14K1Q8NGZ2 314 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 KLF2Q9Y5W3 355 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 TLX3O43711 291 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 FAHP16930 419 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 P2RY4P51582 365 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 PNLIPRP2P54317 469 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 Q499Y3 187 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 WDR74Q6RFH5 385 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 TIPARPQ7Z3E1 657 aaKnown RBP12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 MVB12AQ96EY5 273 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 STRADBQ9C0K7 418 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 POLE3Q9NRF9 147 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 FOXJ2Q9P0K8 574 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 HS3ST3B1Q9Y662 390 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 CCDC168Q8NDH2 2452 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 AKAP13Q12802 2813 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 OR2M5A3KFT3 312 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 M0R296 226 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 PIN1P1O15428 100 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 TNFSF12O43508 249 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 FBXO24O75426 580 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 RPA2P15927 270 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 NME2P22392 152 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 RGS19P49795 217 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 TAS2R43P59537 309 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 SLAMF6Q96DU3 332 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 EIF5A2Q9GZV4 153 aaKnown RBP12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 WIF1Q9Y5W5 379 aa12.54□□□□□ -0.4
TNFRSF11A-201ENST00000269485 ZNF729A6NN14 1252 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF11A-201ENST00000269485 RAB5CP51148 216 aa12.53□□□□□ -0.4
TNFRSF11A-201ENST00000269485 AKR1C8PQ5T2L2 129 aa12.53□□□□□ -0.4
TNFRSF11A-201ENST00000269485 HES3Q5TGS1 186 aa12.53□□□□□ -0.4
TNFRSF11A-201ENST00000269485 OR5AS1Q8N127 324 aa12.53□□□□□ -0.4
TNFRSF11A-201ENST00000269485 ZNF561Q8N587 486 aa12.53□□□□□ -0.4
TNFRSF11A-201ENST00000269485 SULT4A1Q9BR01 284 aa12.53□□□□□ -0.4
TNFRSF11A-201ENST00000269485 FN3KRPQ9HA64 309 aa12.53□□□□□ -0.4
TNFRSF11A-201ENST00000269485 EXOSC3Q9NQT5 275 aaKnown RBP12.53□□□□□ -0.4
TNFRSF11A-201ENST00000269485 NXPH3O95157 252 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms