RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 ZNRF4Q8WWF5 429 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 CNTD2Q9H8S5 307 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 SCPEP1Q9HB40 452 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 SC5DO75845 299 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 NEURL1O76050 574 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 SERPINE2P07093 398 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 PTGFRP43088 359 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 PSG4Q00888 419 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 PRDX4Q13162 271 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 SLC9A3R2Q15599 337 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 KRTCAP3Q53RY4 240 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 SKA3Q8IX90 412 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 FBXL14Q8N1E6 418 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 C12orf45Q8N5I9 185 aaPredicted RBP12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 SECTM1Q8WVN6 248 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 CMBLQ96DG6 245 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 SPACA1Q9HBV2 294 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 ALG5Q9Y673 324 aa12.72□□□□□ -0.37
PDLIM2-201ENST00000265810 SIRPB1O00241 398 aa12.71□□□□□ -0.37
PDLIM2-201ENST00000265810 KIR3DL2P43630 455 aa12.71□□□□□ -0.37
PDLIM2-201ENST00000265810 PPP1CBP62140 327 aa12.71□□□□□ -0.37
PDLIM2-201ENST00000265810 PDCD1Q15116 288 aa12.71□□□□□ -0.37
PDLIM2-201ENST00000265810 OSR2Q8N2R0 312 aa12.71□□□□□ -0.37
PDLIM2-201ENST00000265810 SPERTQ8NA61 448 aa12.71□□□□□ -0.37
PDLIM2-201ENST00000265810 SPTAN1Q13813 2472 aaKnown RBP12.71□□□□□ -0.37
PDLIM2-201ENST00000265810 LRRC30A6NM36 301 aa12.71□□□□□ -0.37
PDLIM2-201ENST00000265810 CYTIPO60759 359 aa12.71□□□□□ -0.37
PDLIM2-201ENST00000265810 GUCA2AQ02747 115 aa12.71□□□□□ -0.37
PDLIM2-201ENST00000265810 IQCF2Q8IXL9 164 aa12.71□□□□□ -0.37
PDLIM2-201ENST00000265810 ABHD17AQ96GS6 310 aa12.71□□□□□ -0.37
PDLIM2-201ENST00000265810 UQCC2Q9BRT2 126 aa12.71□□□□□ -0.37
PDLIM2-201ENST00000265810 SPRY3O43610 288 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 TMEM127O75204 238 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 PNPP00491 289 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 GNG3P63215 75 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 ASAH1Q13510 395 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 Q6ZNX1 250 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 ZNF695Q8IW36 515 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 ZFAND1Q8TCF1 268 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 FBXO17Q96EF6 278 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 OCSTAMPQ9BR26 566 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 GNG12Q9UBI6 72 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 OR14I1A6ND48 311 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 TTRP02766 147 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 DCTDP32321 178 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 OR3A4PP47883 348 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 GSK3AP49840 483 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 NPY4RP50391 375 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 SLC25A53Q5H9E4 307 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 OR8H3Q8N146 312 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 SLAMF9Q96A28 289 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 KCNK15Q9H427 330 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 RAB9BQ9NP90 201 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 KLK13Q9UKR3 277 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 LHFPL6Q9Y693 200 aa12.71□□□□□ -0.38
PDLIM2-201ENST00000265810 HMX3A6NHT5 357 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 SRSF6Q13247 344 aaKnown RBP12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 ADAT1Q9BUB4 502 aaKnown RBP12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 TMEM272A0A1B0GTI8 110 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 TRIM64A6NGJ6 449 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 NPIPB7O75200 414 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 GAAP10253 952 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 PTGER4P35408 488 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 ID4P47928 161 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 GNMTQ14749 295 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 OXA1LQ15070 435 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 BCL2A1Q16548 175 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 MDP1Q86V88 176 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 GABRG1Q8N1C3 465 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 LRRC75AQ8NAA5 344 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 ZBTB8BQ8NAP8 495 aaPredicted RBP12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 OR2Z1Q8NG97 314 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 MAP6Q96JE9 813 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 CITED4Q96RK1 184 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 PINLYPA6NC86 204 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 SDCBPO00560 298 aaPredicted RBP12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 PRH1P02810 166 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 CD3DP04234 171 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 PET100P0DJ07 73 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 KLK2P20151 261 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 ROM1Q03395 351 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 C1orf185Q5T7R7 199 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 NUFIP2Q7Z417 695 aaKnown RBP12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 PRR7Q8TB68 274 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 TECTBQ96PL2 329 aa12.7□□□□□ -0.38
PDLIM2-201ENST00000265810 IGLV3-32A0A0A0MS00 114 aa12.69□□□□□ -0.38
PDLIM2-201ENST00000265810 IGKV1D-43A0A0B4J1Z2 117 aa12.69□□□□□ -0.38
PDLIM2-201ENST00000265810 NPIPB13A6NJU9 1138 aa12.69□□□□□ -0.38
PDLIM2-201ENST00000265810 NPIPB4C9JG80 1138 aa12.69□□□□□ -0.38
PDLIM2-201ENST00000265810 HPNP05981 417 aa12.69□□□□□ -0.38
PDLIM2-201ENST00000265810 HOXB5P09067 269 aa12.69□□□□□ -0.38
PDLIM2-201ENST00000265810 ZNF362Q5T0B9 420 aaPredicted RBP12.69□□□□□ -0.38
PDLIM2-201ENST00000265810 TMEM108Q6UXF1 575 aa12.69□□□□□ -0.38
PDLIM2-201ENST00000265810 PRSS35Q8N3Z0 413 aa12.69□□□□□ -0.38
PDLIM2-201ENST00000265810 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.69□□□□□ -0.38
PDLIM2-201ENST00000265810 PRSS33Q8NF86 280 aa12.69□□□□□ -0.38
PDLIM2-201ENST00000265810 SMIM4Q8WVI0 70 aa12.69□□□□□ -0.38
PDLIM2-201ENST00000265810 OPN3Q9H1Y3 402 aaPredicted RBP12.69□□□□□ -0.38
PDLIM2-201ENST00000265810 ZMIZ1Q9ULJ6 1067 aa12.69□□□□□ -0.38
PDLIM2-201ENST00000265810 CD300LBA8K4G0 201 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms