RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 ZNF735P0CB33 412 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 HLA-GP17693 338 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 EPHA8P29322 1005 aaPredicted RBP6.9□□□□□ -1.31
CXCR4-201ENST00000241393 PTGDSP41222 190 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 CXCL12P48061 93 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 BIDP55957 195 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 H2BFSP57053 126 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 FMODQ06828 376 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 SPOCK1Q08629 439 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 BAMBIQ13145 260 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 MYBPHQ13203 477 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 ZNF260Q3ZCT1 412 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 SIGIRRQ6IA17 410 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 FAHD2BQ6P2I3 314 aaPredicted RBP6.9□□□□□ -1.31
CXCR4-201ENST00000241393 TMEM65Q6PI78 240 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 ARSKQ6UWY0 536 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 DBX2Q6ZNG2 339 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 IDO2Q6ZQW0 420 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 SHISA6Q6ZSJ9 500 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 ZNF627Q7L945 461 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 OR2W3Q7Z3T1 314 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 ZNF584Q8IVC4 421 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 UEVLDQ8IX04 471 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 KDM8Q8N371 416 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 C12orf45Q8N5I9 185 aaPredicted RBP6.9□□□□□ -1.31
CXCR4-201ENST00000241393 ZDHHC22Q8N966 263 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 NOXO1Q8NFA2 376 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 OR1M1Q8NGA1 313 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 OR51A2Q8NGJ7 313 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 OR52B4Q8NGK2 314 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 OR5D14Q8NGL3 314 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 OR6X1Q8NH79 312 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 SCARB1Q8WTV0 552 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 NEU4Q8WWR8 484 aaPredicted RBP6.9□□□□□ -1.31
CXCR4-201ENST00000241393 FAHD2AQ96GK7 314 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 DHRS9Q9BPW9 319 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 PBOV1Q9GZY1 135 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 TTYH1Q9H313 450 aaPredicted RBP6.9□□□□□ -1.31
CXCR4-201ENST00000241393 CENPMQ9NSP4 180 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 LIN7CQ9NUP9 197 aaKnown RBP6.9□□□□□ -1.31
CXCR4-201ENST00000241393 DLL3Q9NYJ7 618 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 NXT1Q9UKK6 140 aaKnown RBP6.9□□□□□ -1.31
CXCR4-201ENST00000241393 HDGFL3Q9Y3E1 203 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 ASXL3Q9C0F0 2248 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 KIF26BQ2KJY2 2108 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 ABCA7Q8IZY2 2146 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 A0A087WZY1 265 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 IGKV1D-43A0A0B4J1Z2 117 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 A0A1B0GTI1 187 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 RFPL4AA6NLU0 287 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 RFPL4AL1F8VTS6 287 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 H3BSH0 61 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 P2RY10O00398 339 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 GOSR2O14653 212 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 YKT6O15498 198 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 TRAF3IP2O43734 574 aaPredicted RBP6.89□□□□□ -1.31
CXCR4-201ENST00000241393 CD8AP01732 235 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 PGA4P0DJD7 388 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 PGA3P0DJD8 388 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 ZNF35P13682 527 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 RAB3AP20336 220 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 CCL1P22362 96 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 HOXA6P31267 233 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 P2RY4P51582 365 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 QRFPP83859 136 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 ZNF169Q14929 603 aaPredicted RBP6.89□□□□□ -1.31
CXCR4-201ENST00000241393 AANATQ16613 207 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 OTPQ5XKR4 325 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 JMJD6Q6NYC1 403 aaPredicted RBP6.89□□□□□ -1.31
CXCR4-201ENST00000241393 SLC25A47Q6Q0C1 308 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 C16orf47Q6ZP98 133 aaPredicted RBP6.89□□□□□ -1.31
CXCR4-201ENST00000241393 TMUB2Q71RG4 321 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 PGAP1Q75T13 922 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 LINC00346Q8IVM7 164 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 BPIFB2Q8N4F0 458 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 FADS6Q8N9I5 356 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 SLC38A9Q8NBW4 561 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 OR2M3Q8NG83 312 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 OR4D6Q8NGJ1 314 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 OR5M1Q8NGP8 315 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 OR6K3Q8NGY3 331 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 SUN5Q8TC36 379 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 NAT6Q93015 286 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 FGGYQ96C11 551 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 SPACA9Q96E40 222 aaPredicted RBP6.89□□□□□ -1.31
CXCR4-201ENST00000241393 OXGR1Q96P68 337 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 OR6C1Q96RD1 312 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 NPAS1Q99742 590 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 KCNK15Q9H427 330 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 CDCP1Q9H5V8 836 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 METTL7AQ9H8H3 244 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 WDR54Q9H977 334 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 MED29Q9NX70 200 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 KCNN3Q9UGI6 736 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 VDAC3Q9Y277 283 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 PLEKHA6Q9Y2H5 1048 aa6.89□□□□□ -1.31
CXCR4-201ENST00000241393 ARID1BQ8NFD5 2236 aaPredicted RBP6.89□□□□□ -1.31
CXCR4-201ENST00000241393 LOC102723996A0A087X1L8 192 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 hCG_1807616A0A1W2PRN6 198 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 LINC00473A8K010 186 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms