RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 LHFPL6Q9Y693 200 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 ANKRD17O75179 2603 aaKnown RBP7.57□□□□□ -1.2
VPS4B-201ENST00000238497 UBE2QL1A1L167 161 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 METTL21EPA6NDL7 271 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 HTR3BO95264 441 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 RAB3AP20336 220 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 LCN1P31025 176 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 FAUP35544 74 aaKnown RBP7.57□□□□□ -1.2
VPS4B-201ENST00000238497 GLIPR1L1Q6UWM5 242 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 AAED1Q7RTV5 226 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 OR1J2Q8NGS2 313 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 ST7LQ8TDW4 575 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 PLEKHA6Q9Y2H5 1048 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 SLC17A2O00624 439 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 CCSO14618 274 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 TRAF3IP2O43734 574 aaPredicted RBP7.56□□□□□ -1.2
VPS4B-201ENST00000238497 EIF1P41567 113 aaKnown RBP7.56□□□□□ -1.2
VPS4B-201ENST00000238497 CLDN15P56746 228 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 ACSF3Q4G176 576 aaPredicted RBP7.56□□□□□ -1.2
VPS4B-201ENST00000238497 BEX5Q5H9J7 111 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 C5orf46Q6UWT4 87 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 IDO2Q6ZQW0 420 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 ZNF584Q8IVC4 421 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 GPR137CQ8N3F9 429 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 ZNF454Q8N9F8 522 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 OR8B12Q8NGG6 310 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 LRRC46Q96FV0 321 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 NICN1Q9BSH3 213 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 POTEKPQ9BYX7 375 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 CSMD1Q96PZ7 3565 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 TRBV5-5A0A0J9YX44 114 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 C13orf42A0A1B0GVH6 325 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 AHRRA9YTQ3 701 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 ZNF878C9JN71 531 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 GOSR2O14653 212 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 ZNF208O43345 1280 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 ANGPTL7O43827 346 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 RAF1P04049 648 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 HPNP05981 417 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 TMEM225BP0DP42 221 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 AGAP20933 346 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 GABRR1P24046 479 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 ERP29P30040 261 aaKnown RBP7.56□□□□□ -1.2
VPS4B-201ENST00000238497 SRD5A2P31213 254 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 GZMKP49863 264 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 KLF9Q13886 244 aaPredicted RBP7.56□□□□□ -1.2
VPS4B-201ENST00000238497 GSG1Q2KHT4 349 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 CCDC92Q53HC0 331 aaPredicted RBP7.56□□□□□ -1.2
VPS4B-201ENST00000238497 OLFML2AQ68BL7 652 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 STEAP1BQ6NZ63 245 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 BTN2A1Q7KYR7 527 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 LIX1LQ8IVB5 337 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 FOXRED2Q8IWF2 684 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 BHLHE23Q8NDY6 225 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 NAA11Q9BSU3 229 aaPredicted RBP7.56□□□□□ -1.2
VPS4B-201ENST00000238497 SRXN1Q9BYN0 137 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 C12orf49Q9H741 205 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 ZNF701Q9NV72 531 aaPredicted RBP7.56□□□□□ -1.2
VPS4B-201ENST00000238497 RHBDD3Q9Y3P4 386 aa7.56□□□□□ -1.2
VPS4B-201ENST00000238497 FAM221AA4D161 298 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 POM121CA8CG34 1229 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 HSPB2A8KAH6 182 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 ZNF736B4DX44 427 aaPredicted RBP7.55□□□□□ -1.2
VPS4B-201ENST00000238497 SDCBPO00560 298 aaPredicted RBP7.55□□□□□ -1.2
VPS4B-201ENST00000238497 XRCC3O43542 346 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 ZIC3O60481 467 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 CREBL2O60519 120 aaPredicted RBP7.55□□□□□ -1.2
VPS4B-201ENST00000238497 ECDO95905 644 aaPredicted RBP7.55□□□□□ -1.2
VPS4B-201ENST00000238497 PMP2P02689 132 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 PGA4P0DJD7 388 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 PGA3P0DJD8 388 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 FCGR2AP12318 317 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 OR3A4PP47883 348 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 HSPB2Q16082 182 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 TRAPPC6BQ86SZ2 158 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 BPIFB2Q8N4F0 458 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 OR1M1Q8NGA1 313 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 OR10S1Q8NGN2 331 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 PHYHIPQ92561 330 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 RADILQ96JH8 1075 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 MNTQ99583 582 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 PIGQQ9BRB3 760 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 G6PC2Q9NQR9 355 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 NOP16Q9Y3C1 178 aaKnown RBP7.55□□□□□ -1.2
VPS4B-201ENST00000238497 ACANP16112 2415 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 ARPC5O15511 151 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 HOXD4P09016 255 aaPredicted RBP7.55□□□□□ -1.2
VPS4B-201ENST00000238497 PTGER4P35408 488 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 ZNF84P51523 738 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 MAP2K6P52564 334 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 SUMO3P55854 103 aaPredicted RBP7.55□□□□□ -1.2
VPS4B-201ENST00000238497 DSCR4P56555 118 aaPredicted RBP7.55□□□□□ -1.2
VPS4B-201ENST00000238497 GNG2P59768 71 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 ASPHD2Q6ICH7 369 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 ZNF774Q6NX45 483 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 RHOUQ7L0Q8 258 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 BIVMQ86UB2 503 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 C20orf196Q8IYI0 205 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 TMEM104Q8NE00 496 aa7.55□□□□□ -1.2
VPS4B-201ENST00000238497 OR11H4Q8NGC9 324 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms