RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 FAM71F1Q96KD3 344 aaPredicted RBP13.68□□□□□ -0.22
DDX55-201ENST00000238146 IP6K3Q96PC2 410 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 NUDT22Q9BRQ3 303 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 SMIM3Q9BZL3 60 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 DUSP15Q9H1R2 295 aaPredicted RBP13.68□□□□□ -0.22
DDX55-201ENST00000238146 C8orf33Q9H7E9 229 aaPredicted RBP13.68□□□□□ -0.22
DDX55-201ENST00000238146 SLC2A4RGQ9NR83 387 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 COPS7AQ9UBW8 275 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 STARD10Q9Y365 291 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 TRAV20A0A0B4J274 112 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 C7orf77A4D0Y5 90 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 SNRNP70P08621 437 aaKnown RBP13.68□□□□□ -0.22
DDX55-201ENST00000238146 LAP3P28838 519 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 THBS4P35443 961 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 FASLGP48023 281 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 TAS2R46P59540 309 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 FABP9Q0Z7S8 132 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 NSUN5P2Q63ZY6 315 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 OR9K2Q8NGE7 335 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 GPER1Q99527 375 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 URM1Q9BTM9 101 aaKnown RBP13.68□□□□□ -0.22
DDX55-201ENST00000238146 OR10A2Q9H208 303 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 GPR27Q9NS67 375 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 KLHL13Q9P2N7 655 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 AMDHD2Q9Y303 409 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 PCDH15Q96QU1 1955 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 A6NLC8 198 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 NAT2P11245 290 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 FAM3AP98173 230 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 HMGN3Q15651 99 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 FAM89BQ8N5H3 189 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 METTL1Q9UBP6 276 aaKnown RBP13.67□□□□□ -0.22
DDX55-201ENST00000238146 IGKV1-9A0A0C4DH69 117 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 TLCD2A6NGC4 264 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 ZNF878C9JN71 531 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 H3BMH7 237 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 EIF1BO60739 113 aaKnown RBP13.67□□□□□ -0.22
DDX55-201ENST00000238146 DEDDO75618 318 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 IFNA2P01563 188 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 ACKR3P25106 362 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 EIF1P41567 113 aaKnown RBP13.67□□□□□ -0.22
DDX55-201ENST00000238146 BLKP51451 505 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 ZNF121P58317 390 aaPredicted RBP13.67□□□□□ -0.22
DDX55-201ENST00000238146 MRPS21P82921 87 aaKnown RBP13.67□□□□□ -0.22
DDX55-201ENST00000238146 IGSF11Q5DX21 431 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 C16orf47Q6ZP98 133 aaPredicted RBP13.67□□□□□ -0.22
DDX55-201ENST00000238146 OR51T1Q8NGJ9 327 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 SSC4DQ8WTU2 575 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 PRRX2Q99811 253 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 SCRT1Q9BWW7 348 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 MOB1AQ9H8S9 216 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 C1orf123Q9NWV4 160 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 SUSD2Q9UGT4 822 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 TSPAN15O95858 294 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 DAOP14920 347 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 RBMXP38159 391 aaKnown RBP13.67□□□□□ -0.22
DDX55-201ENST00000238146 ACY1Q03154 408 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 SURF2Q15527 256 aaPredicted RBP13.67□□□□□ -0.22
DDX55-201ENST00000238146 FAM189A2Q15884 450 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 OPN5Q6U736 354 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 GALNTL5Q7Z4T8 443 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 C1QL2Q7Z5L3 287 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 ST8SIA1Q92185 356 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 TAAR9Q96RI9 348 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 MRPL13Q9BYD1 178 aaKnown RBP13.67□□□□□ -0.22
DDX55-201ENST00000238146 TUBA4BQ9H853 241 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 SERINC1Q9NRX5 453 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 VDAC3Q9Y277 283 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 POLR1DQ9Y2S0 133 aa13.67□□□□□ -0.22
DDX55-201ENST00000238146 A0A1W2PPH5 198 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 GIMD1P0DJR0 217 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 SNCAP37840 140 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 MFAP5Q13361 173 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 MIDNQ504T8 468 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 KRBOX4Q5JUW0 171 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 OR5D18Q8NGL1 313 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.66□□□□□ -0.22
DDX55-201ENST00000238146 B3GAT1Q9P2W7 334 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 GHRLQ9UBU3 117 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 C14orf166Q9Y224 244 aaKnown RBP13.66□□□□□ -0.22
DDX55-201ENST00000238146 ANKUB1A6NFN9 424 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 FOXI3A8MTJ6 420 aaPredicted RBP13.66□□□□□ -0.22
DDX55-201ENST00000238146 H3BML4 177 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 IGHV2-5P01817 119 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 ZNF14P17017 642 aaPredicted RBP13.66□□□□□ -0.22
DDX55-201ENST00000238146 CDAP32320 146 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 PMELP40967 661 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 ZNF84P51523 738 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 KIAA0895LQ68EN5 471 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 UBAC2Q8NBM4 344 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 FNDC9Q8TBE3 224 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 ERGIC1Q969X5 290 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 C20orf24Q9BUV8 137 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 RGCCQ9H4X1 137 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 TUBD1Q9UJT1 453 aa13.66□□□□□ -0.22
DDX55-201ENST00000238146 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.65□□□□□ -0.22
DDX55-201ENST00000238146 LILRA5A6NI73 299 aa13.65□□□□□ -0.22
DDX55-201ENST00000238146 LIPT2A6NK58 231 aa13.65□□□□□ -0.22
DDX55-201ENST00000238146 SHISA8B8ZZ34 492 aa13.65□□□□□ -0.22
DDX55-201ENST00000238146 HPNP05981 417 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms