RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 SOX2P48431 317 aa12.72□□□□□ -0.37
RPA3-201ENST00000223129 BDH1Q02338 343 aa12.72□□□□□ -0.37
RPA3-201ENST00000223129 FAM209AQ5JX71 171 aa12.72□□□□□ -0.37
RPA3-201ENST00000223129 LIPKQ5VXJ0 399 aa12.72□□□□□ -0.37
RPA3-201ENST00000223129 MOB3CQ70IA8 216 aa12.72□□□□□ -0.37
RPA3-201ENST00000223129 TGIF2LYQ8IUE0 185 aa12.72□□□□□ -0.37
RPA3-201ENST00000223129 OPALINQ96PE5 141 aa12.72□□□□□ -0.37
RPA3-201ENST00000223129 SLC22A4Q9H015 551 aa12.72□□□□□ -0.37
RPA3-201ENST00000223129 RBM38Q9H0Z9 239 aaKnown RBP12.72□□□□□ -0.37
RPA3-201ENST00000223129 SAP30LQ9HAJ7 183 aa12.72□□□□□ -0.37
RPA3-201ENST00000223129 GPR173Q9NS66 373 aa12.72□□□□□ -0.37
RPA3-201ENST00000223129 ZNF275Q9NSD4 429 aaPredicted RBP12.72□□□□□ -0.37
RPA3-201ENST00000223129 IL19Q9UHD0 177 aa12.72□□□□□ -0.37
RPA3-201ENST00000223129 LOC100289279A0A1B0GTE1 492 aa12.71□□□□□ -0.37
RPA3-201ENST00000223129 CD55P08174 381 aa12.71□□□□□ -0.37
RPA3-201ENST00000223129 DAOP14920 347 aa12.71□□□□□ -0.37
RPA3-201ENST00000223129 ZNF12P17014 697 aa12.71□□□□□ -0.37
RPA3-201ENST00000223129 TNFSF4P23510 183 aa12.71□□□□□ -0.37
RPA3-201ENST00000223129 RPS11P62280 158 aaKnown RBP eCLIP12.71□□□□□ -0.37
RPA3-201ENST00000223129 ZBTB37Q5TC79 503 aa12.71□□□□□ -0.37
RPA3-201ENST00000223129 KRT74Q7RTS7 529 aa12.71□□□□□ -0.37
RPA3-201ENST00000223129 LRRC75A-AS1Q8N1F1 130 aa12.71□□□□□ -0.37
RPA3-201ENST00000223129 ZNF525Q8N782 197 aa12.71□□□□□ -0.37
RPA3-201ENST00000223129 TSPAN14Q8NG11 270 aa12.71□□□□□ -0.37
RPA3-201ENST00000223129 OR8S1Q8NH09 359 aa12.71□□□□□ -0.37
RPA3-201ENST00000223129 TSEN15Q8WW01 171 aaKnown RBP12.71□□□□□ -0.37
RPA3-201ENST00000223129 ITPKCQ96DU7 683 aa12.71□□□□□ -0.37
RPA3-201ENST00000223129 MEGF10Q96KG7 1140 aa12.71□□□□□ -0.37
RPA3-201ENST00000223129 FGF23Q9GZV9 251 aaPredicted RBP12.71□□□□□ -0.37
RPA3-201ENST00000223129 DHDHQ9UQ10 334 aa12.71□□□□□ -0.37
RPA3-201ENST00000223129 MPC1Q9Y5U8 109 aa12.71□□□□□ -0.37
RPA3-201ENST00000223129 CACNG2Q9Y698 323 aa12.71□□□□□ -0.37
RPA3-201ENST00000223129 A0A1B0GVG6 124 aa12.71□□□□□ -0.38
RPA3-201ENST00000223129 DHRS7CA6NNS2 312 aa12.71□□□□□ -0.38
RPA3-201ENST00000223129 NRASP01111 189 aa12.71□□□□□ -0.38
RPA3-201ENST00000223129 ART1P52961 327 aa12.71□□□□□ -0.38
RPA3-201ENST00000223129 MLLT11Q13015 90 aaPredicted RBP12.71□□□□□ -0.38
RPA3-201ENST00000223129 CLVS2Q5SYC1 327 aa12.71□□□□□ -0.38
RPA3-201ENST00000223129 PRAMEF6Q5VXH4 476 aa12.71□□□□□ -0.38
RPA3-201ENST00000223129 ZNF367Q7RTV3 350 aa12.71□□□□□ -0.38
RPA3-201ENST00000223129 ZDHHC23Q8IYP9 409 aa12.71□□□□□ -0.38
RPA3-201ENST00000223129 CCDC54Q8NEL0 328 aa12.71□□□□□ -0.38
RPA3-201ENST00000223129 GPR148Q8TDV2 347 aa12.71□□□□□ -0.38
RPA3-201ENST00000223129 UBASH3BQ8TF42 649 aa12.71□□□□□ -0.38
RPA3-201ENST00000223129 HPSE2Q8WWQ2 592 aa12.71□□□□□ -0.38
RPA3-201ENST00000223129 EGLN1Q9GZT9 426 aa12.71□□□□□ -0.38
RPA3-201ENST00000223129 PRRC2AP48634 2157 aaKnown RBP12.7□□□□□ -0.38
RPA3-201ENST00000223129 ANKRD61A6NGH8 418 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 ANXA2P2A6NMY6 339 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 INMTO95050 263 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 GRPP07492 148 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 OCM2P0CE71 109 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 THBS2P35442 1172 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 TPBGQ13641 420 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 INSL4Q14641 139 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 UBE2V2Q15819 145 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 CARTPTQ16568 116 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 ARMCX4Q5H9R4 360 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 UBE2UQ5VVX9 321 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 PLCXD3Q63HM9 321 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 TMEM42Q69YG0 159 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 KCTD8Q6ZWB6 473 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 WDR86Q86TI4 376 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 OR5P3Q8WZ94 311 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 UFD1Q92890 307 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 YIPF5Q969M3 257 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 ITFG2Q969R8 447 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 ORAI1Q96D31 301 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 TMED9Q9BVK6 235 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 CXXC4Q9H2H0 198 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 ISYNA1Q9NPH2 558 aa12.7□□□□□ -0.38
RPA3-201ENST00000223129 CD1AP06126 327 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 ZNF20P17024 532 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 CD200P41217 278 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 SRP9P49458 86 aaKnown RBP12.69□□□□□ -0.38
RPA3-201ENST00000223129 MPPED2Q15777 294 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 NEDD8Q15843 81 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 YIF1BQ5BJH7 314 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 KRTAP1-3Q8IUG1 177 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 ZNF420Q8TAQ5 688 aaPredicted RBP12.69□□□□□ -0.38
RPA3-201ENST00000223129 NPRL2Q8WTW4 380 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 TMEM203Q969S6 136 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 RNF170Q96K19 258 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 HIST1H2AAQ96QV6 131 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 FOXC2Q99958 501 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 BARX1Q9HBU1 254 aaPredicted RBP12.69□□□□□ -0.38
RPA3-201ENST00000223129 UFSP2Q9NUQ7 469 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 NOP16Q9Y3C1 178 aaKnown RBP12.69□□□□□ -0.38
RPA3-201ENST00000223129 CCDC168Q8NDH2 2452 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 A0A087WXM4 84 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 IGHV1-69-2A0A0G2JMI3 117 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.69□□□□□ -0.38
RPA3-201ENST00000223129 A0A1W2PPK0 400 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 CCDC160A6NGH7 325 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 CPEP16870 476 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 PSMB9P28065 219 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 CRYBB2P43320 205 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 GPM6AP51674 278 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 TESK1Q15569 626 aa12.69□□□□□ -0.38
RPA3-201ENST00000223129 CEACAM21Q3KPI0 293 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms