RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ARPC4-TTLL3A0A0A6YYG9 625 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 ANKUB1A6NFN9 424 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 SCGB1D2O95969 90 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 GSTP1P09211 210 aaKnown RBP12.36□□□□□ -0.43
USH1C-201ENST00000005226 PTGER4P35408 488 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 PRSS12P56730 875 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 IL34Q6ZMJ4 242 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 ARRDC1Q8N5I2 433 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 ZNF283Q8N7M2 679 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 NANPQ8TBE9 248 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 SMIM8Q96KF7 97 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 C20orf24Q9BUV8 137 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 ZNF701Q9NV72 531 aaPredicted RBP12.36□□□□□ -0.43
USH1C-201ENST00000005226 OSGIN2Q9Y236 505 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 LSM5Q9Y4Y9 91 aaKnown RBP12.36□□□□□ -0.43
USH1C-201ENST00000005226 SPAG17Q6Q759 2223 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 ZNF708P17019 499 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 FPR2P25090 351 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 SLC6A9P48067 706 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 PPT1P50897 306 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 HSD11B2P80365 405 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 HABP2Q14520 560 aaPredicted RBP12.36□□□□□ -0.43
USH1C-201ENST00000005226 SWI5Q1ZZU3 235 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 IAH1Q2TAA2 248 aaPredicted RBP12.36□□□□□ -0.43
USH1C-201ENST00000005226 SULT4A1Q9BR01 284 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 MRPL13Q9BYD1 178 aaKnown RBP12.36□□□□□ -0.43
USH1C-201ENST00000005226 OR10A2Q9H208 303 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 ZNF581Q9P0T4 197 aa12.36□□□□□ -0.43
USH1C-201ENST00000005226 RALGAPA1Q6GYQ0 2036 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 A0A1B0GV50 99 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 VSTM2BA6NLU5 285 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 ACAA1P09110 424 aaPredicted RBP12.35□□□□□ -0.43
USH1C-201ENST00000005226 SFTPDP35247 375 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 FAM76BQ5HYJ3 339 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 Q6ZRG5 221 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 ISOC2Q96AB3 205 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 DDIT4LQ96D03 193 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 NECAB3Q96P71 396 aaPredicted RBP12.35□□□□□ -0.43
USH1C-201ENST00000005226 OCSTAMPQ9BR26 566 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 KLRF1Q9NZS2 232 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 ATPIF1Q9UII2 106 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 NCOA6Q14686 2063 aaPredicted RBP12.35□□□□□ -0.43
USH1C-201ENST00000005226 ZNF878C9JN71 531 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 STMND1H3BQB6 276 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 HPNP05981 417 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 FCGR3AP08637 254 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 FOSL2P15408 326 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 NME1P15531 152 aaKnown RBP12.35□□□□□ -0.43
USH1C-201ENST00000005226 GABREP78334 506 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 C17orf67Q0P5P2 114 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 IL15RAQ13261 267 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 SP6Q3SY56 376 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 FAM69BQ5VUD6 431 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 C6orf201Q7Z4U5 140 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 PEG10Q86TG7 708 aaKnown RBP12.35□□□□□ -0.43
USH1C-201ENST00000005226 LHFPL1Q86WI0 220 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 OR56B1Q8NGI3 324 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 NAA11Q9BSU3 229 aaPredicted RBP12.35□□□□□ -0.43
USH1C-201ENST00000005226 FBXL17Q9UF56 701 aa12.35□□□□□ -0.43
USH1C-201ENST00000005226 A0A1W2PPE3 182 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 LYL1P12980 280 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 RPL12P30050 165 aaKnown RBP12.34□□□□□ -0.43
USH1C-201ENST00000005226 FCGR2CP31995 323 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 APOBEC1P41238 236 aaKnown RBP12.34□□□□□ -0.43
USH1C-201ENST00000005226 FHITP49789 147 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 GSK3AP49840 483 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 BTNL8Q6UX41 500 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 Q7L0L9 218 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 UEVLDQ8IX04 471 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 PIGTQ969N2 578 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 MRPL38Q96DV4 380 aaKnown RBP12.34□□□□□ -0.43
USH1C-201ENST00000005226 OR5B2Q96R09 309 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 RPS10P5Q9NQ39 176 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 FBLN5Q9UBX5 448 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 F5H5K5 113 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 NME2P1O60361 137 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 SCGNO76038 276 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 QDPRP09417 244 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 CD38P28907 300 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 KISS1Q15726 138 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 CHRFAM7AQ494W8 412 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 CRIP3Q6Q6R5 217 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.34□□□□□ -0.43
USH1C-201ENST00000005226 APCDD1LQ8NCL9 501 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 NAXEQ8NCW5 288 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 LILRB1Q8NHL6 650 aaPredicted RBP12.34□□□□□ -0.43
USH1C-201ENST00000005226 POC1BQ8TC44 478 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 ST8SIA1Q92185 356 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 ERGIC1Q969X5 290 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 MRPL24Q96A35 216 aaKnown RBP12.34□□□□□ -0.43
USH1C-201ENST00000005226 KIRREL1Q96J84 757 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 ANAPC10Q9UM13 185 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 EDARQ9UNE0 448 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 B3GALT5Q9Y2C3 310 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 RPH3AQ9Y2J0 694 aaPredicted RBP12.34□□□□□ -0.43
USH1C-201ENST00000005226 AMDHD2Q9Y303 409 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 WIF1Q9Y5W5 379 aa12.34□□□□□ -0.43
USH1C-201ENST00000005226 DHRS7CA6NNS2 312 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 SNRNP70P08621 437 aaKnown RBP12.33□□□□□ -0.44
USH1C-201ENST00000005226 PGA4P0DJD7 388 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms