RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Tmem8aQ9ESN3 769 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 ReckQ9Z0J1 971 aa10.95□□□□□ -0.66
Trim56-201ENSMUST00000054384 Nanos2P60322 136 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Usp22Q5DU02 525 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr890Q7TRD9 314 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Mob1aQ921Y0 216 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Dtd1Q9DD18 209 aaKnown RBP10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Isyna1Q9JHU9 557 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ank1Q02357 1862 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Prr36E9PV26 1098 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Tbx15O70306 602 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 CorinQ9Z319 1113 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Slc47a2Q3V050 573 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Lrtm2Q8BGX3 370 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Duoxa1Q8VE49 341 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Mus81Q91ZJ0 551 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Golt1aQ9DCQ3 133 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 StrapQ9Z1Z2 350 aaKnown RBP10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr1006A2ALD2 312 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Mef2bO55087 349 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gpx3P46412 226 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Rhox4gQ2MDF7 205 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Cramp1Q6PG95 1285 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Adprhl1Q8BGK2 353 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Vmn1r32Q8R2D9 302 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Mrpl37Q921S7 423 aaKnown RBP10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Rpl7l1Q9D8M4 246 aaKnown RBP10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Dusp6Q9DBB1 381 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Myo5aQ99104 1853 aaKnown RBP10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Pgbd5D3YZI9 523 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 EbpP70245 230 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 IhhP97812 411 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Trav8d-2Q5R1B6 112 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 H2-M10.6Q85ZW5 330 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr1261Q8VFB0 306 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr488Q8VG02 314 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Arpc3Q9JM76 178 aaKnown RBP10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Wfdc16A2A5H4 111 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Pcdh1F7BJK1 1077 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr13P34984 310 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 P2rx1P51576 399 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Nufip2Q5F2E7 692 aaKnown RBP10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 PtafrQ62035 341 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr1170Q8VFG1 316 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr862Q8VFJ1 306 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Chrm5Q920H4 532 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Chrm2Q9ERZ4 466 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Rab9aQ9R0M6 201 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Btbd35f23A0A0R4J2B9 498 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Amer3Q6NS69 780 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr923Q7TRB9 317 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Dcaf12Q8BGZ3 453 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr166Q8VGX2 312 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Hhipl2Q9D2G9 717 aa10.94□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr911-ps1A0A140T8K0 311 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Fndc10A2A9Q0 223 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 DytnA2CI98 653 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 P01800 113 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Twist1P26687 206 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Elk1P41969 429 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ttyh2Q3TH73 532 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Neil2Q6R2P8 329 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ifna12Q80SS5 189 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Slc49a3Q8CE47 516 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Vmn1r26Q8R2D7 339 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr827Q8VEV5 322 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Raf1Q99N57 648 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ceacam13Q9DAT7 263 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Thbs4Q9Z1T2 963 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 FAM186AQ9D9R9 1790 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Btbd35f28A2CFD5 498 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Cd79bP15530 228 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Pou3f3P31361 497 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 ErhP84089 104 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 A1bgQ19LI2 512 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr1229Q7TQZ9 311 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr1113Q7TR54 326 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Tmem267Q8VDR5 215 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr646Q8VGW2 312 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 TrirQ9D735 173 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ppp1r17Q9Z2E4 159 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Cfap77A0A087WRI3 283 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Zfp109A0A0U1RPC5 652 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Slc25a34A2ADF7 318 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gm14325A2AW67 498 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr251E9Q891 316 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Tead1P30051 426 aaKnown RBP10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Smn1P97801 288 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr201Q7TS38 308 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Defb22Q8BVC1 179 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Vmn1r87Q8R255 295 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr788Q8VFI0 311 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr346Q8VGJ7 309 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Fzd9Q9R216 592 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gdf7P43029 461 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Hist1h1bP43276 223 aaKnown RBP10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Rps23P62267 143 aaKnown RBP10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gm1527Q3V0P3 650 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ldlrad4Q8BWJ4 306 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Mrpl38Q8K2M0 380 aa10.93□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 62.3 ms