RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Olfr1438-ps1A0A140LHS9 319 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Zfp69A2A761 587 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Gm45711E0CXA2 391 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Il5raP21183 415 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Adamts15P59384 950 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Cd55bQ61476 407 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Mapk3Q63844 380 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Olfr1115Q7TR53 326 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Stk35Q80ZW0 539 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Olfr560A0A1B0GSU5 314 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Gm2035J3QP87 144 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 P01822 137 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Pnliprp2P17892 482 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 ShbQ6PD21 503 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Olfr275Q7TS18 319 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Pias2Q8C5D8 621 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Olfr826Q8VFU6 313 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Serpinb1bQ8VHP7 382 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 B3gat1Q9CW73 334 aa15.1■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Ascc3E9PZJ8 2198 aaKnown RBP15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Ighv5-15A0A0A6YWC7 117 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Olfr785A0A0N4SVC3 312 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Fam90a1aA2A4E2 429 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Vmn1r129E9QA94 307 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Gm8720K9J7F4 307 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Pbx2O35984 430 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Ext1P97464 746 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Glycam1Q02596 151 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 MENTQ569E4 350 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Mtcp1Q60945 107 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Phox2aQ62066 280 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Mrpl22Q8BU88 206 aaKnown RBP15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Olfr1347Q8VF33 319 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Spred2Q924S7 410 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Yaf2Q99LW6 179 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Commd4Q9CQ02 199 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Asb12Q9D738 308 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Nat8Q9JIY7 227 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Spint2Q9WU03 252 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Brca2P97929 3329 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Slc25a43A2A3V2 341 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 AurkcO88445 282 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 MycP01108 439 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Sim2Q61079 657 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 2210407C18RikQ6YI28 220 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Cnksr3Q8BMA3 555 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Prps1l1Q8C5R8 318 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Neil1Q8K4Q6 389 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Sav1Q8VEB2 386 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Olfr870Q8VGG4 311 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Mtif3Q9CZD5 276 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Lcn9Q9D267 178 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Olfr710Q9EP55 310 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Rbfox1Q9JJ43 396 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Trbv15A0A0A6YYE3 115 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Vmn2r76E9Q3F5 853 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Gm3633L7N233 213 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Gm9611L7N476 213 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Dll3O88516 592 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Hhipl1Q14DK5 791 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Adat3Q6PAT0 349 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Cpeb4Q7TN98 729 aaKnown RBP15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Olfr1080Q7TR67 313 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Clba1Q8BHN9 321 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Parp11Q8CFF0 331 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Vmn1r211Q8R266 298 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Olfr862Q8VFJ1 306 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Asb18Q8VHA6 467 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 OgfrQ99PG2 633 aa15.09■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Gm42372A0A1B0GT27 204 aa15.08■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Ajm1A2AJA9 974 aa15.08■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Aadacl4B1AVU5 407 aa15.08■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Phb2O35129 299 aaKnown RBP15.08■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Galr3O88853 370 aa15.08■□□□□ 0.01
Ctcf-201ENSMUST00000005841 GhrhrP32082 423 aa15.08■□□□□ 0.01
Ctcf-201ENSMUST00000005841 CdaP56389 146 aa15.08■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Gtf2f2Q8R0A0 249 aa15.08■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Cdc42ep1Q91W92 409 aa15.08■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Hrasls5Q9CPX5 270 aa15.08■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Tex29Q9DA77 186 aa15.08■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Ppp1r17Q9Z2E4 159 aa15.08■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Trip12G5E870 2025 aaKnown RBP15.08■□□□□ 0.01
Ctcf-201ENSMUST00000005841 Fbxw27A0A1D5RLF0 466 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Atxn7l3A2AWT3 347 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Drd3P30728 446 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Abcd3P55096 659 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Foxred1Q3TQB2 487 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Cd34Q64314 382 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Slc35f2Q7TML3 375 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Naa40Q8VE10 237 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Q99K99 313 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Sapcd1Q9CY86 146 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Samd8Q9DA37 478 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Smco4Q9JIS3 59 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 SrpxQ9R0M3 464 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Kcne3Q9WTW2 103 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Gm2075J3QMW5 144 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Galr2O88854 371 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Hoxb3P09026 433 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 P18524 117 aa15.08■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms