RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 ANKRD37Q7Z713 158 aa12.21□□□□□ -0.46
PHGDH-233ENST00000642021 NAA40Q86UY6 237 aa12.21□□□□□ -0.46
PHGDH-233ENST00000642021 OR5D18Q8NGL1 313 aa12.21□□□□□ -0.46
PHGDH-233ENST00000642021 OR10C1Q96KK4 312 aa12.21□□□□□ -0.46
PHGDH-233ENST00000642021 NUDT16L1Q9BRJ7 211 aaKnown RBP12.21□□□□□ -0.46
PHGDH-233ENST00000642021 SLC6A15Q9H2J7 730 aa12.21□□□□□ -0.46
PHGDH-233ENST00000642021 TMEM231Q9H6L2 316 aa12.21□□□□□ -0.46
PHGDH-233ENST00000642021 KLRF1Q9NZS2 232 aa12.21□□□□□ -0.46
PHGDH-233ENST00000642021 ANAPC10Q9UM13 185 aa12.21□□□□□ -0.46
PHGDH-233ENST00000642021 ZNF878C9JN71 531 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 DUX1O43812 170 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 GIMD1P0DJR0 217 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 TPT1P13693 172 aaKnown RBP12.2□□□□□ -0.46
PHGDH-233ENST00000642021 CX3CR1P49238 355 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 RELQ04864 619 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-233ENST00000642021 DTX1Q86Y01 620 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 CBLN2Q8IUK8 224 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 SLC25A45Q8N413 288 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 ST6GALNAC5Q9BVH7 336 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 TMEM59Q9BXS4 323 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 TLNRD1Q9H1K6 362 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 PNRC2Q9NPJ4 139 aaKnown RBP12.2□□□□□ -0.46
PHGDH-233ENST00000642021 CNTRLQ7Z7A1 2325 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 A0A1W2PNV4 684 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 STMND1H3BQB6 276 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 SIGLEC6O43699 453 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 TRAF3IP2O43734 574 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-233ENST00000642021 CRTAPO75718 401 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-233ENST00000642021 SCGNO76038 276 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 HTR3BO95264 441 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 TIAF1O95411 115 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 SFT2D2O95562 160 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 HCKP08631 526 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 GLRA1P23415 457 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 GABREP78334 506 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 RAB30Q15771 203 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 MST1LQ2TV78 715 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 PLPPR5Q32ZL2 321 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 VAX1Q5SQQ9 334 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 AADACL3Q5VUY0 350 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 CRIP3Q6Q6R5 217 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 PGAP1Q75T13 922 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 OR2AJ1Q8NGZ0 328 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 OR13G1Q8NGZ3 307 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 OR51F2Q8NH61 342 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 KCNG3Q8TAE7 436 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 HPF1Q9NWY4 346 aa12.2□□□□□ -0.46
PHGDH-233ENST00000642021 TRBV11-1A0A0K0K1C0 115 aa12.19□□□□□ -0.46
PHGDH-233ENST00000642021 CEACAM18A8MTB9 384 aa12.19□□□□□ -0.46
PHGDH-233ENST00000642021 MFNGO00587 321 aa12.19□□□□□ -0.46
PHGDH-233ENST00000642021 GSTP1P09211 210 aaKnown RBP12.19□□□□□ -0.46
PHGDH-233ENST00000642021 PTGDSP41222 190 aa12.19□□□□□ -0.46
PHGDH-233ENST00000642021 DHPSP49366 369 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-233ENST00000642021 AIMP2Q13155 320 aaKnown RBP12.19□□□□□ -0.46
PHGDH-233ENST00000642021 SMAD4Q13485 552 aaKnown RBP12.19□□□□□ -0.46
PHGDH-233ENST00000642021 FAM57BQ71RH2 274 aa12.19□□□□□ -0.46
PHGDH-233ENST00000642021 UEVLDQ8IX04 471 aa12.19□□□□□ -0.46
PHGDH-233ENST00000642021 OR10G3Q8NGC4 313 aa12.19□□□□□ -0.46
PHGDH-233ENST00000642021 ZNF775Q96BV0 537 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-233ENST00000642021 SAV1Q9H4B6 383 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-233ENST00000642021 SEMA5BQ9P283 1151 aa12.19□□□□□ -0.46
PHGDH-233ENST00000642021 FLVCR1Q9Y5Y0 555 aa12.19□□□□□ -0.46
PHGDH-233ENST00000642021 ASCC3Q8N3C0 2202 aaKnown RBP12.19□□□□□ -0.46
PHGDH-233ENST00000642021 ETV2O00321 342 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-233ENST00000642021 H2AFB1P0C5Y9 115 aa12.19□□□□□ -0.46
PHGDH-233ENST00000642021 TAS2R31P59538 309 aa12.19□□□□□ -0.46
PHGDH-233ENST00000642021 RSPO4Q2I0M5 234 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-233ENST00000642021 DRAM2Q6UX65 266 aa12.19□□□□□ -0.46
PHGDH-233ENST00000642021 NOXO1Q8NFA2 376 aa12.19□□□□□ -0.46
PHGDH-233ENST00000642021 NPRL2Q8WTW4 380 aa12.19□□□□□ -0.46
PHGDH-233ENST00000642021 LIN37Q96GY3 246 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-233ENST00000642021 WDR77Q9BQA1 342 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-233ENST00000642021 OR2S2Q9NQN1 319 aa12.19□□□□□ -0.46
PHGDH-233ENST00000642021 PPP4R1LQ9P1A2 415 aa12.19□□□□□ -0.46
PHGDH-233ENST00000642021 ZNF629Q9UEG4 869 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-233ENST00000642021 EDARQ9UNE0 448 aa12.19□□□□□ -0.46
PHGDH-233ENST00000642021 IGHG1P01857 330 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 SUMO3P55854 103 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-233ENST00000642021 SSTP61278 116 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 FAM69BQ5VUD6 431 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 SLC25A47Q6Q0C1 308 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 SVBPQ8N300 66 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 ARRDC1Q8N5I2 433 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 NUBPLQ8TB37 319 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 SSC4DQ8WTU2 575 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 RNF141Q8WVD5 230 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 OR5B2Q96R09 309 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 GPER1Q99527 375 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 OCSTAMPQ9BR26 566 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 F8W036 122 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 HEXBP07686 556 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 QDPRP09417 244 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 ZNF41P51814 821 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-233ENST00000642021 BLOC1S1P78537 153 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 CYCSP99999 105 aaKnown RBP12.18□□□□□ -0.46
PHGDH-233ENST00000642021 NAAAQ02083 359 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 RAB32Q13637 225 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 ARFRP1Q13795 201 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 ANKRD39Q53RE8 183 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 ZNF585AQ6P3V2 769 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms