RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 ELP5Q8TE02 316 aa14.79□□□□□ -0.04
PHGDH-223ENST00000641597 SAP25Q8TEE9 199 aa14.79□□□□□ -0.04
PHGDH-223ENST00000641597 PGAM5Q96HS1 289 aa14.79□□□□□ -0.04
PHGDH-223ENST00000641597 RBM24Q9BX46 236 aaKnown RBP14.79□□□□□ -0.04
PHGDH-223ENST00000641597 ZNF107Q9UII5 783 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-223ENST00000641597 AHCTF1Q8WYP5 2266 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 IGLV3-32A0A0A0MS00 114 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 A0A0B4J2A0 478 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 PATE4P0C8F1 98 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 UBBP0CG47 229 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 MSX1P28360 303 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 RPS27AP62979 156 aaKnown RBP14.78□□□□□ -0.04
PHGDH-223ENST00000641597 UBA52P62987 128 aaKnown RBP14.78□□□□□ -0.04
PHGDH-223ENST00000641597 DEFA5Q01523 94 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 SRSF4Q08170 494 aaKnown RBP14.78□□□□□ -0.04
PHGDH-223ENST00000641597 PCOLCEQ15113 449 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 ANKRD55Q3KP44 614 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 HSD17B13Q7Z5P4 300 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-223ENST00000641597 TMEM185AQ8NFB2 350 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 OR51T1Q8NGJ9 327 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 OR1S2Q8NGQ3 325 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 OR13G1Q8NGZ3 307 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 OR2AE1Q8NHA4 323 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 SLC22A8Q8TCC7 542 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 RNF126Q9BV68 326 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 CHMP1AQ9HD42 196 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-223ENST00000641597 SHPKQ9UHJ6 478 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 KRBOX1C9JBD0 128 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 DUS4LO95620 317 aaKnown RBP14.78□□□□□ -0.04
PHGDH-223ENST00000641597 FGL1Q08830 312 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 CDCP2Q5VXM1 449 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 MRPL14Q6P1L8 145 aaKnown RBP14.78□□□□□ -0.04
PHGDH-223ENST00000641597 CLEC18BQ6UXF7 455 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 MOB3CQ70IA8 216 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 OR51F2Q8NH61 342 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 THAP6Q8TBB0 222 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 DCUN1D4Q92564 292 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 ADAT1Q9BUB4 502 aaKnown RBP14.78□□□□□ -0.04
PHGDH-223ENST00000641597 PROK2Q9HC23 129 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 LHX6Q9UPM6 363 aa14.78□□□□□ -0.04
PHGDH-223ENST00000641597 ASPMQ8IZT6 3477 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 FAM74A7A6NL05 159 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 DBX1A6NMT0 343 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 MFNGO00587 321 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 CRHP06850 196 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 UMODP07911 640 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 CD63P08962 238 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 SLC25A4P12235 298 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 NTF4P34130 210 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 SRSF3P84103 164 aaKnown RBP14.77□□□□□ -0.04
PHGDH-223ENST00000641597 ENDOGQ14249 297 aaKnown RBP14.77□□□□□ -0.04
PHGDH-223ENST00000641597 SNAI3Q3KNW1 292 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 FAM74A3Q4VXF1 159 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 GALNTL5Q7Z4T8 443 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 FOXRED2Q8IWF2 684 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 FADS6Q8N9I5 356 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 PNLDC1Q8NA58 520 aaKnown RBP14.77□□□□□ -0.04
PHGDH-223ENST00000641597 ZSCAN4Q8NAM6 433 aaPredicted RBP14.77□□□□□ -0.04
PHGDH-223ENST00000641597 DTWD2Q8NBA8 298 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 OR52H1Q8NGJ2 320 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 KCNG3Q8TAE7 436 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 ZNF160Q9HCG1 818 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 ASF1BQ9NVP2 202 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 OR5AC2Q9NZP5 309 aa14.77□□□□□ -0.04
PHGDH-223ENST00000641597 A0A0G2JMM0 328 aa14.77□□□□□ -0.05
PHGDH-223ENST00000641597 A0A1W2PPB8 328 aa14.77□□□□□ -0.05
PHGDH-223ENST00000641597 A0A1W2PRS3 328 aa14.77□□□□□ -0.05
PHGDH-223ENST00000641597 KIR3DP1A8MWS1 328 aa14.77□□□□□ -0.05
PHGDH-223ENST00000641597 OR2F2O95006 317 aa14.77□□□□□ -0.05
PHGDH-223ENST00000641597 BLVRBP30043 206 aaPredicted RBP14.77□□□□□ -0.05
PHGDH-223ENST00000641597 PPIAP62937 165 aaKnown RBP14.77□□□□□ -0.05
PHGDH-223ENST00000641597 OR2F1Q13607 317 aa14.77□□□□□ -0.05
PHGDH-223ENST00000641597 ZNF273Q14593 569 aa14.77□□□□□ -0.05
PHGDH-223ENST00000641597 TFAP2EQ6VUC0 442 aa14.77□□□□□ -0.05
PHGDH-223ENST00000641597 C6orf201Q7Z4U5 140 aa14.77□□□□□ -0.05
PHGDH-223ENST00000641597 OR10C1Q96KK4 312 aa14.77□□□□□ -0.05
PHGDH-223ENST00000641597 RTBDNQ9BSG5 229 aaPredicted RBP14.77□□□□□ -0.05
PHGDH-223ENST00000641597 SLC25A32Q9H2D1 315 aa14.77□□□□□ -0.05
PHGDH-223ENST00000641597 PTRH2Q9Y3E5 179 aaKnown RBP14.77□□□□□ -0.05
PHGDH-223ENST00000641597 ARPC4-TTLL3A0A0A6YYG9 625 aa14.76□□□□□ -0.05
PHGDH-223ENST00000641597 TNFSF11O14788 317 aa14.76□□□□□ -0.05
PHGDH-223ENST00000641597 TOX3O15405 576 aaPredicted RBP14.76□□□□□ -0.05
PHGDH-223ENST00000641597 ANGPTL7O43827 346 aa14.76□□□□□ -0.05
PHGDH-223ENST00000641597 F10P00742 488 aa14.76□□□□□ -0.05
PHGDH-223ENST00000641597 HPNP05981 417 aa14.76□□□□□ -0.05
PHGDH-223ENST00000641597 AMY2BP19961 511 aa14.76□□□□□ -0.05
PHGDH-223ENST00000641597 CNR1P21554 472 aa14.76□□□□□ -0.05
PHGDH-223ENST00000641597 SNTB1Q13884 538 aaKnown RBP14.76□□□□□ -0.05
PHGDH-223ENST00000641597 AADACL3Q5VUY0 350 aa14.76□□□□□ -0.05
PHGDH-223ENST00000641597 LYSMD4Q5XG99 296 aa14.76□□□□□ -0.05
PHGDH-223ENST00000641597 LPCAT3Q6P1A2 487 aa14.76□□□□□ -0.05
PHGDH-223ENST00000641597 BRICD5Q6PL45 260 aa14.76□□□□□ -0.05
PHGDH-223ENST00000641597 DRAM2Q6UX65 266 aa14.76□□□□□ -0.05
PHGDH-223ENST00000641597 PCDHB10Q9UN67 800 aa14.76□□□□□ -0.05
PHGDH-223ENST00000641597 MSTNO14793 375 aa14.76□□□□□ -0.05
PHGDH-223ENST00000641597 KNG1P01042 644 aa14.76□□□□□ -0.05
PHGDH-223ENST00000641597 CFIP05156 583 aa14.76□□□□□ -0.05
PHGDH-223ENST00000641597 FCGR2AP12318 317 aa14.76□□□□□ -0.05
PHGDH-223ENST00000641597 MPZP25189 248 aa14.76□□□□□ -0.05
PHGDH-223ENST00000641597 PSMB6P28072 239 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms