RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 SYNPRQ8TBG9 265 aa7.73□□□□□ -1.17
PHGDH-219ENST00000641513 GIMAP1Q8WWP7 306 aa7.73□□□□□ -1.17
PHGDH-219ENST00000641513 ZFP3Q96NJ6 502 aa7.73□□□□□ -1.17
PHGDH-219ENST00000641513 NUDT16L1Q9BRJ7 211 aaKnown RBP7.73□□□□□ -1.17
PHGDH-219ENST00000641513 TMPRSS13Q9BYE2 586 aa7.73□□□□□ -1.17
PHGDH-219ENST00000641513 WNT5BQ9H1J7 359 aa7.73□□□□□ -1.17
PHGDH-219ENST00000641513 OR10A2Q9H208 303 aa7.73□□□□□ -1.17
PHGDH-219ENST00000641513 TMEM165Q9HC07 324 aa7.73□□□□□ -1.17
PHGDH-219ENST00000641513 GPN1Q9HCN4 374 aaPredicted RBP7.73□□□□□ -1.17
PHGDH-219ENST00000641513 NPDC1Q9NQX5 325 aaPredicted RBP7.73□□□□□ -1.17
PHGDH-219ENST00000641513 PLSCR3Q9NRY6 295 aa7.73□□□□□ -1.17
PHGDH-219ENST00000641513 MTFP1Q9UDX5 166 aa7.73□□□□□ -1.17
PHGDH-219ENST00000641513 HEATR1Q9H583 2144 aaKnown RBP7.72□□□□□ -1.17
PHGDH-219ENST00000641513 LOC100289279A0A1B0GTE1 492 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 LOC390937A0A1W2PQ73 354 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 OR6C6A6NF89 314 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 FIGNL2A6NMB9 653 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 C1QTNF9BB2RNN3 333 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 FABP7O15540 132 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 WDR1O75083 606 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 SCGNO76038 276 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 RGS11O94810 467 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 GIPP09681 153 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-219ENST00000641513 C1QTNF9P0C862 333 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 GABRA1P14867 456 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 IGFBP3P17936 291 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-219ENST00000641513 CTSSP25774 331 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 ARR3P36575 388 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 CLDN12P56749 244 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 ACTBP60709 375 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 ACTG1P63261 375 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 PLP2Q04941 152 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 SPOCK1Q08629 439 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 RBMS2Q15434 407 aaKnown RBP7.72□□□□□ -1.17
PHGDH-219ENST00000641513 RAB11BQ15907 218 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 NRN1LQ496H8 165 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 HIKESHIQ53FT3 197 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 C1orf185Q5T7R7 199 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 ZBTB37Q5TC79 503 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 NSUN5P2Q63ZY6 315 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 GLT8D1Q68CQ7 371 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 THOC7Q6I9Y2 204 aaKnown RBP7.72□□□□□ -1.17
PHGDH-219ENST00000641513 VWA1Q6PCB0 445 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 DRAM2Q6UX65 266 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 TFAP2EQ6VUC0 442 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 GLDNQ6ZMI3 551 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-219ENST00000641513 ADGRE4PQ86SQ3 457 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 SERPINA12Q8IW75 414 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 JAGN1Q8N5M9 183 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 PLPP7Q8NBV4 271 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 OR6M1Q8NGM8 313 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 OR1K1Q8NGR3 316 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 OR6K3Q8NGY3 331 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 OR52I2Q8NH67 350 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 NANOS1Q8WY41 292 aaKnown RBP7.72□□□□□ -1.17
PHGDH-219ENST00000641513 ZCCHC14Q8WYQ9 949 aaKnown RBP7.72□□□□□ -1.17
PHGDH-219ENST00000641513 FOXRED1Q96CU9 486 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-219ENST00000641513 BEX2Q9BXY8 128 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 ALX4Q9H161 411 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-219ENST00000641513 AUNIPQ9H7T9 357 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 MYOZ1Q9NP98 299 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-219ENST00000641513 ZNF319Q9P2F9 582 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 ELF5Q9UKW6 265 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-219ENST00000641513 PROCRQ9UNN8 238 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 HSPB11Q9Y547 144 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 AUP1Q9Y679 476 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 FRYQ5TBA9 3013 aa7.72□□□□□ -1.17
PHGDH-219ENST00000641513 TRAV6A0A075B6T7 132 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 A0A1B0GTI1 187 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 C5orf63A6NC05 138 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 LINC00862A6NCI5 91 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 GGT3PA6NGU5 568 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 ICMTO60725 284 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 RAD51DO75771 328 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 LYZL6O75951 148 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 OR2A4O95047 310 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 IL2RAP01589 272 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 MT-ND4P03905 459 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 ITGA5P08648 1049 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 MMP7P09237 267 aaPredicted RBP7.71□□□□□ -1.18
PHGDH-219ENST00000641513 TMIGD3P0DMS9 266 aaPredicted RBP7.71□□□□□ -1.18
PHGDH-219ENST00000641513 RAB6AP20340 208 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 CRYGSP22914 178 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 CDK2P24941 298 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 HOXC12P31275 282 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 KIR2DL2P43627 348 aaPredicted RBP7.71□□□□□ -1.18
PHGDH-219ENST00000641513 SRP9P49458 86 aaKnown RBP7.71□□□□□ -1.18
PHGDH-219ENST00000641513 UBE2NP61088 152 aaKnown RBP7.71□□□□□ -1.18
PHGDH-219ENST00000641513 RAP2BP61225 183 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 RAB1AP62820 205 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 TGFBR3Q03167 851 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 FOXF2Q12947 444 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 ZMYND11Q15326 602 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 MPPED2Q15777 294 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 ST3GAL2Q16842 350 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 RSPO1Q2MKA7 263 aaPredicted RBP7.71□□□□□ -1.18
PHGDH-219ENST00000641513 SNAI3Q3KNW1 292 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 C1orf100Q5SVJ3 147 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 ZNF626Q68DY1 528 aa7.71□□□□□ -1.18
PHGDH-219ENST00000641513 UNQ6494/PRO21346Q6UXR6 183 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms