RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 RHBDD1Q8TEB9 315 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 TCEAL3Q969E4 200 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 TMEM41AQ96HV5 264 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 NPIPA1Q9UND3 350 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 MMACHCQ9Y4U1 282 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 PIAS3Q9Y6X2 628 aa12.12□□□□□ -0.47
PAX6-280ENST00000640872 A0A1W2PPE3 182 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 TMEM150CB9EJG8 249 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 ZNF708P17019 499 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 ADH6P28332 368 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 DAP3P51398 398 aaKnown RBP12.11□□□□□ -0.47
PAX6-280ENST00000640872 OR2A2Q6IF42 318 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 KLHL24Q6TFL4 600 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 ZNF561Q8N587 486 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 SECTM1Q8WVN6 248 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 C11orf40Q8WZ69 217 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 PHF3Q92576 2039 aaKnown RBP12.11□□□□□ -0.47
PAX6-280ENST00000640872 A0A1W2PP11 408 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 B4DGG1 531 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 EIF1BO60739 113 aaKnown RBP12.11□□□□□ -0.47
PAX6-280ENST00000640872 MT-ND4LP03901 98 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 GAPDHP04406 335 aaKnown RBP12.11□□□□□ -0.47
PAX6-280ENST00000640872 GLRA1P23415 457 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 EIF1P41567 113 aaKnown RBP12.11□□□□□ -0.47
PAX6-280ENST00000640872 OR3A4PP47883 348 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 HMGN3Q15651 99 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 AKIRIN2Q53H80 203 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 NSUN5P2Q63ZY6 315 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 C5orf46Q6UWT4 87 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 KCNG3Q8TAE7 436 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 SLC39A7Q92504 469 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 ARHGAP5-AS1Q96IT6 56 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 BANF2Q9H503 90 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 GSKIPQ9P0R6 139 aa12.11□□□□□ -0.47
PAX6-280ENST00000640872 METTL1Q9UBP6 276 aaKnown RBP12.11□□□□□ -0.47
PAX6-280ENST00000640872 NPIPB13A6NJU9 1138 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 FIGNL2A6NMB9 653 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 NPIPB4C9JG80 1138 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 ADAM10O14672 748 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 S100A6P06703 90 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 HOXB5P09067 269 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 ZNF20P17024 532 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 AMY2BP19961 511 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 PMELP40967 661 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 CAPZBP47756 277 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 EFNA3P52797 238 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 KDF1Q8NAX2 398 aaPredicted RBP12.1□□□□□ -0.47
PAX6-280ENST00000640872 OR51E1Q8TCB6 317 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 TAAR9Q96RI9 348 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 TMEM59Q9BXS4 323 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 CNTNAP3Q9BZ76 1288 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 TUBA4BQ9H853 241 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 RPS10P5Q9NQ39 176 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 NIT2Q9NQR4 276 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 MED29Q9NX70 200 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 MEMO1Q9Y316 297 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 STARD10Q9Y365 291 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 SPTY2D1-AS1A0A0U1RR47 76 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 HTR3BO95264 441 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 FZD2Q14332 565 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 IGSF11Q5DX21 431 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 HLA-DQA1Q5Y7H0 255 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 SOX7Q9BT81 388 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 WWTR1Q9GZV5 400 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 FBXL17Q9UF56 701 aa12.1□□□□□ -0.47
PAX6-280ENST00000640872 TRAV20A0A0B4J274 112 aa12.09□□□□□ -0.47
PAX6-280ENST00000640872 C10orf142B7Z368 130 aa12.09□□□□□ -0.47
PAX6-280ENST00000640872 IGHV2-5P01817 119 aa12.09□□□□□ -0.47
PAX6-280ENST00000640872 CTSEP14091 401 aa12.09□□□□□ -0.47
PAX6-280ENST00000640872 RPL12P30050 165 aaKnown RBP12.09□□□□□ -0.47
PAX6-280ENST00000640872 THBS4P35443 961 aa12.09□□□□□ -0.47
PAX6-280ENST00000640872 POU3F1Q03052 451 aaPredicted RBP12.09□□□□□ -0.47
PAX6-280ENST00000640872 FABP9Q0Z7S8 132 aa12.09□□□□□ -0.47
PAX6-280ENST00000640872 AWAT1Q58HT5 328 aa12.09□□□□□ -0.47
PAX6-280ENST00000640872 GKN2Q86XP6 184 aa12.09□□□□□ -0.47
PAX6-280ENST00000640872 OR56B1Q8NGI3 324 aa12.09□□□□□ -0.47
PAX6-280ENST00000640872 FBXO17Q96EF6 278 aa12.09□□□□□ -0.47
PAX6-280ENST00000640872 ARL5BQ96KC2 179 aa12.09□□□□□ -0.47
PAX6-280ENST00000640872 TCEAL7Q9BRU2 100 aa12.09□□□□□ -0.47
PAX6-280ENST00000640872 SCRT1Q9BWW7 348 aa12.09□□□□□ -0.47
PAX6-280ENST00000640872 OR51M1Q9H341 326 aa12.09□□□□□ -0.47
PAX6-280ENST00000640872 B3GALT5Q9Y2C3 310 aa12.09□□□□□ -0.47
PAX6-280ENST00000640872 RPH3AQ9Y2J0 694 aaPredicted RBP12.09□□□□□ -0.47
PAX6-280ENST00000640872 C7orf77A4D0Y5 90 aa12.08□□□□□ -0.47
PAX6-280ENST00000640872 SHISA7A6NL88 538 aa12.08□□□□□ -0.47
PAX6-280ENST00000640872 SDCBPO00560 298 aaPredicted RBP12.08□□□□□ -0.47
PAX6-280ENST00000640872 JTBO76095 146 aa12.08□□□□□ -0.47
PAX6-280ENST00000640872 IGHV4-34P06331 123 aa12.08□□□□□ -0.47
PAX6-280ENST00000640872 SFTPBP07988 381 aa12.08□□□□□ -0.47
PAX6-280ENST00000640872 ACKR3P25106 362 aa12.08□□□□□ -0.47
PAX6-280ENST00000640872 PTGER4P35408 488 aa12.08□□□□□ -0.47
PAX6-280ENST00000640872 OR1D4P47884 311 aa12.08□□□□□ -0.47
PAX6-280ENST00000640872 FAM3AP98173 230 aa12.08□□□□□ -0.47
PAX6-280ENST00000640872 HSF1Q00613 529 aa12.08□□□□□ -0.47
PAX6-280ENST00000640872 RAB30Q15771 203 aa12.08□□□□□ -0.47
PAX6-280ENST00000640872 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.08□□□□□ -0.47
PAX6-280ENST00000640872 H1FNTQ75WM6 255 aaPredicted RBP12.08□□□□□ -0.47
PAX6-280ENST00000640872 TMPRSS9Q7Z410 1059 aa12.08□□□□□ -0.47
PAX6-280ENST00000640872 FOXRED2Q8IWF2 684 aa12.08□□□□□ -0.47
PAX6-280ENST00000640872 OR10H5Q8NGA6 315 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms