RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 ZNF485Q8NCK3 441 aa11.68□□□□□ -0.54
HLA-C-210ENST00000640219 RDH5Q92781 318 aa11.68□□□□□ -0.54
HLA-C-210ENST00000640219 KCTD12Q96CX2 325 aaKnown RBP11.68□□□□□ -0.54
HLA-C-210ENST00000640219 SLC25A44Q96H78 314 aaPredicted RBP11.68□□□□□ -0.54
HLA-C-210ENST00000640219 BOD1Q96IK1 185 aa11.68□□□□□ -0.54
HLA-C-210ENST00000640219 ZNF75AQ96N20 296 aa11.68□□□□□ -0.54
HLA-C-210ENST00000640219 ALG8Q9BVK2 526 aa11.68□□□□□ -0.54
HLA-C-210ENST00000640219 MIXL1Q9H2W2 232 aa11.68□□□□□ -0.54
HLA-C-210ENST00000640219 OR51B6Q9H340 312 aa11.68□□□□□ -0.54
HLA-C-210ENST00000640219 ZMAT3Q9HA38 289 aaKnown RBP11.68□□□□□ -0.54
HLA-C-210ENST00000640219 B3GAT2Q9NPZ5 323 aa11.68□□□□□ -0.54
HLA-C-210ENST00000640219 CMC2Q9NRP2 79 aa11.68□□□□□ -0.54
HLA-C-210ENST00000640219 B3GNT2Q9NY97 397 aa11.68□□□□□ -0.54
HLA-C-210ENST00000640219 KLHL21Q9UJP4 597 aa11.68□□□□□ -0.54
HLA-C-210ENST00000640219 ZNF346Q9UL40 294 aaKnown RBP11.68□□□□□ -0.54
HLA-C-210ENST00000640219 HIF3AQ9Y2N7 669 aa11.68□□□□□ -0.54
HLA-C-210ENST00000640219 LINC00854A0A1B0GVQ3 168 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 HTR3EA5X5Y0 456 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 DNAJC9-AS1A6NH13 148 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 C12orf71A8MTZ7 269 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 DHHO43323 396 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 PPIHO43447 177 aaKnown RBP11.67□□□□□ -0.54
HLA-C-210ENST00000640219 PLPP2O43688 288 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 IDH3BO43837 385 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 SERPINA3P01011 423 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 IGHG1P01857 330 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 CBR1P16152 277 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 NOS3P29474 1203 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 FXYD6P3P58550 94 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 GALEQ14376 348 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 ZNF79Q15937 498 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 BAK1Q16611 211 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 SLC35F1Q5T1Q4 408 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 DCAF12L2Q5VW00 463 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 SPATC1Q76KD6 591 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 TPRA1Q86W33 373 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 ZNF584Q8IVC4 421 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 SLC22A24Q8N4F4 322 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 PAQR4Q8N4S7 273 aaPredicted RBP11.67□□□□□ -0.54
HLA-C-210ENST00000640219 ZFP41Q8N8Y5 198 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 OR10H4Q8NGA5 316 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 LIPHQ8WWY8 451 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 DVL3Q92997 716 aaPredicted RBP11.67□□□□□ -0.54
HLA-C-210ENST00000640219 RASD2Q96D21 266 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 ZNF486Q96H40 463 aaPredicted RBP11.67□□□□□ -0.54
HLA-C-210ENST00000640219 ATF6BQ99941 703 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 MRPL13Q9BYD1 178 aaKnown RBP11.67□□□□□ -0.54
HLA-C-210ENST00000640219 NEK6Q9HC98 313 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 ZNF275Q9NSD4 429 aaPredicted RBP11.67□□□□□ -0.54
HLA-C-210ENST00000640219 TMEM38BQ9NVV0 291 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 FZR1Q9UM11 496 aa11.67□□□□□ -0.54
HLA-C-210ENST00000640219 WNK1Q9H4A3 2382 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 CENPXA8MT69 81 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 BHLHE40O14503 412 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 HPXP02790 462 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 ZNF14P17017 642 aaPredicted RBP11.66□□□□□ -0.54
HLA-C-210ENST00000640219 MDKP21741 143 aaPredicted RBP11.66□□□□□ -0.54
HLA-C-210ENST00000640219 DDOSTP39656 456 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 MAP2K3P46734 347 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 EVX1P49640 407 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 IL18Q14116 193 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 HIST3H3Q16695 136 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 GSG1Q2KHT4 349 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 ZFP69Q49AA0 526 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 CNIH2Q6PI25 160 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 PLET1Q6UQ28 207 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 OAFQ86UD1 273 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 RDH10Q8IZV5 341 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 BBS1Q8NFJ9 593 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 Q96M85 177 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 NDEL1Q9GZM8 345 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 TXNIPQ9H3M7 391 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 MS4A5Q9H3V2 200 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 ZNF665Q9H7R5 613 aa11.66□□□□□ -0.54
HLA-C-210ENST00000640219 MEIOCA2RUB1 952 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 J3QRE1 110 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 SYNGR3O43761 229 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 HPGDSO60760 199 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 FSHBP01225 129 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 IGF2P01344 180 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 RFX2P48378 723 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 DAP3P51398 398 aaKnown RBP11.65□□□□□ -0.54
HLA-C-210ENST00000640219 RAB25P57735 213 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 ERVS71-1P61550 626 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 RAB1AP62820 205 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 SNTB2Q13425 540 aaKnown RBP11.65□□□□□ -0.54
HLA-C-210ENST00000640219 MESTQ5EB52 335 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 ZMAT1Q5H9K5 638 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 HACD4Q5VWC8 232 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 DOK3Q7L591 496 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 C1QL4Q86Z23 238 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 Q8N402 240 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 MS4A15Q8N5U1 240 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 SLC37A3Q8NCC5 494 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 ZNF519Q8TB69 540 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 CAPSLQ8WWF8 208 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 TAF15Q92804 592 aaKnown RBP eCLIP11.65□□□□□ -0.54
HLA-C-210ENST00000640219 YIPF5Q969M3 257 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 TEAD3Q99594 435 aa11.65□□□□□ -0.54
HLA-C-210ENST00000640219 OR51V1Q9H2C8 321 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms