RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 NAA40Q86UY6 237 aa13.23□□□□□ -0.29
TRIM3-215ENST00000639856 C20orf196Q8IYI0 205 aa13.23□□□□□ -0.29
TRIM3-215ENST00000639856 LRRC18Q8N456 261 aa13.23□□□□□ -0.29
TRIM3-215ENST00000639856 BPIFB2Q8N4F0 458 aa13.23□□□□□ -0.29
TRIM3-215ENST00000639856 CCDC107Q8WV48 283 aa13.23□□□□□ -0.29
TRIM3-215ENST00000639856 POFUT1Q9H488 388 aa13.23□□□□□ -0.29
TRIM3-215ENST00000639856 MRPS28Q9Y2Q9 187 aaKnown RBP13.23□□□□□ -0.29
TRIM3-215ENST00000639856 FLVCR1Q9Y5Y0 555 aa13.23□□□□□ -0.29
TRIM3-215ENST00000639856 PRRC2CQ9Y520 2896 aaKnown RBP13.23□□□□□ -0.29
TRIM3-215ENST00000639856 HCKP08631 526 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 OTX1P32242 354 aaPredicted RBP13.22□□□□□ -0.29
TRIM3-215ENST00000639856 LHX2P50458 406 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 CCL11P51671 97 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 CAMK2BQ13554 666 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 MEF2DQ14814 521 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 C4orf46Q504U0 113 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 ABLIM2Q6H8Q1 611 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 GLIPR1L1Q6UWM5 242 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 TRAPPC6BQ86SZ2 158 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 UXS1Q8NBZ7 420 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 OR4S1Q8NGB4 309 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 OR10R2Q8NGX6 335 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 TNFAIP8L1Q8WVP5 186 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 ZNF837Q96EG3 531 aaPredicted RBP13.22□□□□□ -0.29
TRIM3-215ENST00000639856 C1orf147Q96MC9 270 aaPredicted RBP13.22□□□□□ -0.29
TRIM3-215ENST00000639856 IRF2BPLQ9H1B7 796 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 CLEC4MQ9H2X3 399 aaPredicted RBP13.22□□□□□ -0.29
TRIM3-215ENST00000639856 MYOZ1Q9NP98 299 aaPredicted RBP13.22□□□□□ -0.29
TRIM3-215ENST00000639856 B3GNT2Q9NY97 397 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 KLF13Q9Y2Y9 288 aaPredicted RBP13.22□□□□□ -0.29
TRIM3-215ENST00000639856 A0A0U1RQV5 110 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 PLSCR5A0PG75 271 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 C5orf63A6NC05 138 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 F5H5K5 113 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 CHRM2P08172 466 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 OR3A4PP47883 348 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 H2BFSP57053 126 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 SOX8P57073 446 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 MRPS34P82930 218 aaKnown RBP13.22□□□□□ -0.29
TRIM3-215ENST00000639856 C2orf68Q2NKX9 166 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.22□□□□□ -0.29
TRIM3-215ENST00000639856 SSC4DQ8WTU2 575 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 ABHD3Q8WU67 409 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 WDR89Q96FK6 387 aaPredicted RBP13.22□□□□□ -0.29
TRIM3-215ENST00000639856 LYZL4Q96KX0 146 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 SLC6A7Q99884 636 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 TMPRSS13Q9BYE2 586 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 SELENOIQ9C0D9 397 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 LPAR5Q9H1C0 372 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 SLC2A8Q9NY64 477 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 OPN4Q9UHM6 478 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 RTTNQ86VV8 2226 aa13.22□□□□□ -0.29
TRIM3-215ENST00000639856 IGKV1-9A0A0C4DH69 117 aa13.21□□□□□ -0.29
TRIM3-215ENST00000639856 OR14I1A6ND48 311 aa13.21□□□□□ -0.29
TRIM3-215ENST00000639856 DISC1C4P0D8 188 aa13.21□□□□□ -0.29
TRIM3-215ENST00000639856 MPC2O95563 127 aa13.21□□□□□ -0.29
TRIM3-215ENST00000639856 OR4E1P0C645 316 aa13.21□□□□□ -0.29
TRIM3-215ENST00000639856 GNB3P16520 340 aa13.21□□□□□ -0.29
TRIM3-215ENST00000639856 SLC6A9P48067 706 aa13.21□□□□□ -0.29
TRIM3-215ENST00000639856 CLDN18P56856 261 aa13.21□□□□□ -0.29
TRIM3-215ENST00000639856 UBE2MP61081 183 aaKnown RBP13.21□□□□□ -0.29
TRIM3-215ENST00000639856 CLN3Q13286 438 aa13.21□□□□□ -0.29
TRIM3-215ENST00000639856 RSPO1Q2MKA7 263 aaPredicted RBP13.21□□□□□ -0.29
TRIM3-215ENST00000639856 RNASE10Q5GAN6 216 aaKnown RBP13.21□□□□□ -0.29
TRIM3-215ENST00000639856 FAM27BQ5VT28 67 aa13.21□□□□□ -0.29
TRIM3-215ENST00000639856 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.21□□□□□ -0.29
TRIM3-215ENST00000639856 TMEM104Q8NE00 496 aa13.21□□□□□ -0.29
TRIM3-215ENST00000639856 FDCSPQ8NFU4 85 aa13.21□□□□□ -0.29
TRIM3-215ENST00000639856 OR13C8Q8NGS7 320 aa13.21□□□□□ -0.29
TRIM3-215ENST00000639856 KCNG3Q8TAE7 436 aa13.21□□□□□ -0.29
TRIM3-215ENST00000639856 NUDCD2Q8WVJ2 157 aa13.21□□□□□ -0.29
TRIM3-215ENST00000639856 NICN1Q9BSH3 213 aa13.21□□□□□ -0.29
TRIM3-215ENST00000639856 DPCDQ9BVM2 203 aaPredicted RBP13.21□□□□□ -0.29
TRIM3-215ENST00000639856 KLRC4-KLRK1H3BQV0 150 aa13.21□□□□□ -0.3
TRIM3-215ENST00000639856 SNAPC5O75971 98 aa13.21□□□□□ -0.3
TRIM3-215ENST00000639856 SLC22A5O76082 557 aa13.21□□□□□ -0.3
TRIM3-215ENST00000639856 APOC1P02654 83 aa13.21□□□□□ -0.3
TRIM3-215ENST00000639856 CD46P15529 392 aa13.21□□□□□ -0.3
TRIM3-215ENST00000639856 PPIAP62937 165 aaKnown RBP13.21□□□□□ -0.3
TRIM3-215ENST00000639856 ECH1Q13011 328 aa13.21□□□□□ -0.3
TRIM3-215ENST00000639856 IKZF1Q13422 519 aa13.21□□□□□ -0.3
TRIM3-215ENST00000639856 MPPED2Q15777 294 aa13.21□□□□□ -0.3
TRIM3-215ENST00000639856 GRK1Q15835 563 aa13.21□□□□□ -0.3
TRIM3-215ENST00000639856 SCGB2B2Q4G0G5 96 aa13.21□□□□□ -0.3
TRIM3-215ENST00000639856 ZNF766Q5HY98 468 aa13.21□□□□□ -0.3
TRIM3-215ENST00000639856 ATPAF1Q5TC12 328 aaPredicted RBP13.21□□□□□ -0.3
TRIM3-215ENST00000639856 GVQW1Q8N7I0 195 aa13.21□□□□□ -0.3
TRIM3-215ENST00000639856 PRRT1Q99946 306 aa13.21□□□□□ -0.3
TRIM3-215ENST00000639856 PLEK2Q9NYT0 353 aa13.21□□□□□ -0.3
TRIM3-215ENST00000639856 LIPGQ9Y5X9 500 aa13.21□□□□□ -0.3
TRIM3-215ENST00000639856 FRYQ5TBA9 3013 aa13.2□□□□□ -0.3
TRIM3-215ENST00000639856 H3BUI4 141 aa13.2□□□□□ -0.3
TRIM3-215ENST00000639856 GOSR2O14653 212 aa13.2□□□□□ -0.3
TRIM3-215ENST00000639856 CDC14BO60729 498 aa13.2□□□□□ -0.3
TRIM3-215ENST00000639856 DHRS3O75911 302 aa13.2□□□□□ -0.3
TRIM3-215ENST00000639856 SIX6O95475 246 aa13.2□□□□□ -0.3
TRIM3-215ENST00000639856 MPIG6BO95866 241 aa13.2□□□□□ -0.3
TRIM3-215ENST00000639856 MPZP25189 248 aa13.2□□□□□ -0.3
TRIM3-215ENST00000639856 RNFT1Q5M7Z0 435 aa13.2□□□□□ -0.3
TRIM3-215ENST00000639856 TMED4Q7Z7H5 227 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms