RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 DEFB109BQ30KR1 87 aa12.65□□□□□ -0.38
CHD1L-211ENST00000639534 LINC00303Q3SY05 128 aa12.65□□□□□ -0.38
CHD1L-211ENST00000639534 SFRP5Q5T4F7 317 aa12.65□□□□□ -0.38
CHD1L-211ENST00000639534 COLCA1Q6ZS62 124 aa12.65□□□□□ -0.38
CHD1L-211ENST00000639534 LHFPL2Q6ZUX7 228 aa12.65□□□□□ -0.38
CHD1L-211ENST00000639534 ZADH2Q8N4Q0 377 aa12.65□□□□□ -0.38
CHD1L-211ENST00000639534 C1orf147Q96MC9 270 aaPredicted RBP12.65□□□□□ -0.38
CHD1L-211ENST00000639534 NKX3-1Q99801 234 aaPredicted RBP12.65□□□□□ -0.38
CHD1L-211ENST00000639534 OR10A4Q9H209 315 aa12.65□□□□□ -0.38
CHD1L-211ENST00000639534 TP63Q9H3D4 680 aaPredicted RBP12.65□□□□□ -0.38
CHD1L-211ENST00000639534 PCDHB16Q9NRJ7 776 aa12.65□□□□□ -0.38
CHD1L-211ENST00000639534 DLL3Q9NYJ7 618 aa12.65□□□□□ -0.38
CHD1L-211ENST00000639534 NKIRAS2Q9NYR9 191 aa12.65□□□□□ -0.38
CHD1L-211ENST00000639534 SCP2D1Q9UJQ7 156 aa12.65□□□□□ -0.38
CHD1L-211ENST00000639534 ALPK2Q86TB3 2170 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 PCNX2A6NKB5 2137 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 hCG_38984A0A1B0GV85 526 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 C5orf63A6NC05 138 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 A8MV72 311 aaPredicted RBP12.64□□□□□ -0.39
CHD1L-211ENST00000639534 ARPC1BO15143 372 aaKnown RBP12.64□□□□□ -0.39
CHD1L-211ENST00000639534 SSNA1O43805 119 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 CA11O75493 328 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 OR3A2P47893 321 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 VEGFCP49767 419 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 RPS27AP62979 156 aaKnown RBP12.64□□□□□ -0.39
CHD1L-211ENST00000639534 FAPQ12884 760 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 MALLQ13021 153 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 PPA1Q15181 289 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 FCN2Q15485 313 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 OR8B8Q15620 311 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 MOGAT2Q3SYC2 334 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 ACTBL2Q562R1 376 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 TMEM255AQ5JRV8 349 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 RNFT1Q5M7Z0 435 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 FBXW9Q5XUX1 488 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 TMEM42Q69YG0 159 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 GLDNQ6ZMI3 551 aaPredicted RBP12.64□□□□□ -0.39
CHD1L-211ENST00000639534 TRAPPC6BQ86SZ2 158 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 CCDC36Q8IYA8 594 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 FAM89BQ8N5H3 189 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 FGFBP3Q8TAT2 258 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 CCDC107Q8WV48 283 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 TNFAIP8L1Q8WVP5 186 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 SARAFQ96BY9 339 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 RAB3CQ96E17 227 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 POM121Q96HA1 1249 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 DMRTB1Q96MA1 342 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 IFT46Q9NQC8 304 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.64□□□□□ -0.39
CHD1L-211ENST00000639534 NPDC1Q9NQX5 325 aaPredicted RBP12.64□□□□□ -0.39
CHD1L-211ENST00000639534 MYEF2Q9P2K5 600 aaKnown RBP12.64□□□□□ -0.39
CHD1L-211ENST00000639534 ITGB1BP2Q9UKP3 347 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 ING4Q9UNL4 249 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 SLC7A11Q9UPY5 501 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 PLEKHA6Q9Y2H5 1048 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 KCNMB2Q9Y691 235 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 VCANP13611 3396 aa12.64□□□□□ -0.39
CHD1L-211ENST00000639534 PHF3Q92576 2039 aaKnown RBP12.64□□□□□ -0.39
CHD1L-211ENST00000639534 ZNF816-ZNF321PA0A0X1KG74 233 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 TMEM235A6NFC5 223 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 CREBL2O60519 120 aaPredicted RBP12.63□□□□□ -0.39
CHD1L-211ENST00000639534 ZNF780AO75290 641 aaPredicted RBP12.63□□□□□ -0.39
CHD1L-211ENST00000639534 CRTAPO75718 401 aaPredicted RBP12.63□□□□□ -0.39
CHD1L-211ENST00000639534 IGHV3-9P01782 118 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 CD3DP04234 171 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 PATE4P0C8F1 98 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 SULT1A3P0DMM9 295 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 SULT1A4P0DMN0 295 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 HIST1H1DP16402 221 aaKnown RBP12.63□□□□□ -0.39
CHD1L-211ENST00000639534 WT1P19544 449 aaPredicted RBP12.63□□□□□ -0.39
CHD1L-211ENST00000639534 ANOS1P23352 680 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 CPT2P23786 658 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 GNG2P59768 71 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 HGFACQ04756 655 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 SRSF6Q13247 344 aaKnown RBP12.63□□□□□ -0.39
CHD1L-211ENST00000639534 SF3B4Q15427 424 aaKnown RBP eCLIP12.63□□□□□ -0.394e-7■■■■■ 28.9
CHD1L-211ENST00000639534 C3AR1Q16581 482 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 ST3GAL2Q16842 350 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 NUFIP2Q7Z417 695 aaKnown RBP12.63□□□□□ -0.39
CHD1L-211ENST00000639534 FJX1Q86VR8 437 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 APOBEC3DQ96AK3 386 aaPredicted RBP12.63□□□□□ -0.39
CHD1L-211ENST00000639534 RNF170Q96K19 258 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 HYLS1Q96M11 299 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 FYTTD1Q96QD9 318 aaKnown RBP12.63□□□□□ -0.39
CHD1L-211ENST00000639534 SPACA5Q96QH8 159 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 PRRT1Q99946 306 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 GAL3ST1Q99999 423 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 GINS4Q9BRT9 223 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 TM2D1Q9BX74 207 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 ALX4Q9H161 411 aaPredicted RBP12.63□□□□□ -0.39
CHD1L-211ENST00000639534 METTL9Q9H1A3 318 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 RANBP3Q9H6Z4 567 aaPredicted RBP12.63□□□□□ -0.39
CHD1L-211ENST00000639534 MYOZ1Q9NP98 299 aaPredicted RBP12.63□□□□□ -0.39
CHD1L-211ENST00000639534 SLC2A8Q9NY64 477 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 KCNN3Q9UGI6 736 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 POU2F3Q9UKI9 436 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 FRYLO94915 3013 aa12.63□□□□□ -0.39
CHD1L-211ENST00000639534 PTPRBP23467 1997 aa12.62□□□□□ -0.39
CHD1L-211ENST00000639534 MEIKINA0A087WXM9 373 aa12.62□□□□□ -0.39
CHD1L-211ENST00000639534 UBE2QL1A1L167 161 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms