RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 SCNM1Q9BWG6 230 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 ULBP2Q9BZM5 246 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 RBMX2Q9Y388 322 aaKnown RBP6.3□□□□□ -1.4
BRCA1-230ENST00000634433 ALG5Q9Y673 324 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 MYO15AQ9UKN7 3530 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 IGHV3-15A0A0B4J1V0 119 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 A0A0G2JMM0 328 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 A0A1W2PPB8 328 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 A0A1W2PRS3 328 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 KIR3DP1A8MWS1 328 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 SULT1C2O00338 296 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 RBBP9O75884 186 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 SCGNO76038 276 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 TTRP02766 147 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 TCRBP04435 133 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 CEACAM1P13688 526 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 ARSBP15848 533 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 ZNF20P17024 532 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 PRKACAP17612 351 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 CDKN1BP46527 198 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 SRP9P49458 86 aaKnown RBP6.3□□□□□ -1.4
BRCA1-230ENST00000634433 SSTP61278 116 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 HYAL4Q2M3T9 481 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 C9orf152Q5JTZ5 239 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 C1orf100Q5SVJ3 147 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 CFAP77Q6ZQR2 320 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 PGAP1Q75T13 922 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 ZNF283Q8N7M2 679 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 ASCC1Q8N9N2 400 aaKnown RBP6.3□□□□□ -1.4
BRCA1-230ENST00000634433 OR2M7Q8NG81 312 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 OR10S1Q8NGN2 331 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 OR52I2Q8NH67 350 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 UPRTQ96BW1 309 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 ZNF385AQ96PM9 386 aaKnown RBP6.3□□□□□ -1.4
BRCA1-230ENST00000634433 RBM24Q9BX46 236 aaKnown RBP6.3□□□□□ -1.4
BRCA1-230ENST00000634433 SRXN1Q9BYN0 137 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 TMEM138Q9NPI0 162 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 DDX28Q9NUL7 540 aaKnown RBP6.3□□□□□ -1.4
BRCA1-230ENST00000634433 ING3Q9NXR8 418 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 WASF3Q9UPY6 502 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 KNTC1P50748 2209 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 EML6Q6ZMW3 1958 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 LOC390937A0A1W2PQ73 354 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 METTL21EPA6NDL7 271 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 GGT3PA6NGU5 568 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 LCATP04180 440 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 RFPL3SP0C7P2 107 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 KLK2P20151 261 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 RAB3AP20336 220 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 RAB6AP20340 208 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 G0S2P27469 103 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 CX3CR1P49238 355 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 RRADP55042 308 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 MRPS34P82930 218 aaKnown RBP6.29□□□□□ -1.4
BRCA1-230ENST00000634433 ECH1Q13011 328 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 SNTB1Q13884 538 aaKnown RBP6.29□□□□□ -1.4
BRCA1-230ENST00000634433 OR1C1Q15619 314 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 ZFP69Q49AA0 526 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 RNASE12Q5GAN4 147 aaKnown RBP6.29□□□□□ -1.4
BRCA1-230ENST00000634433 ELFN2Q5R3F8 820 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 GLYATL3Q5SZD4 288 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 ATAD3CQ5T2N8 411 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 SPINK14Q6IE38 97 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 DNM1P46Q6ZS02 220 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 DOK3Q7L591 496 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 GGNQ86UU5 652 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 GPR137CQ8N3F9 429 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 SLC22A24Q8N4F4 322 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 JAGN1Q8N5M9 183 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 ZIC4Q8N9L1 334 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 ZNF610Q8N9Z0 462 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 OR1M1Q8NGA1 313 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 AKAP1Q92667 903 aaKnown RBP eCLIP6.29□□□□□ -1.4
BRCA1-230ENST00000634433 ST6GAL2Q96JF0 529 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 ADGRG7Q96K78 797 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 ZNF416Q9BWM5 594 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 DEPPQ9NTK1 212 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 PAQR5Q9NXK6 330 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-230ENST00000634433 RAB22AQ9UL26 194 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 KLF13Q9Y2Y9 288 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-230ENST00000634433 SDK2Q58EX2 2172 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 TMEM272A0A1B0GTI8 110 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 ANKRD20A5PA0PJZ0 165 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 RER1O15258 196 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 CXCL13O43927 109 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 NEURL1O76050 574 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 HPNP05981 417 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 H2AFB2P0C5Z0 115 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 GIFP27352 417 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 PRSS3P35030 304 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 PRKXP51817 358 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 UCP2P55851 309 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 ZNF121P58317 390 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-230ENST00000634433 HIST1H3AP68431 136 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 NKX6-1P78426 367 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-230ENST00000634433 SPOCK1Q08629 439 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 FAM189A2Q15884 450 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 RIPPLY2Q5TAB7 128 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 HIST2H3PS2Q5TEC6 136 aa6.29□□□□□ -1.4
BRCA1-230ENST00000634433 FAM27BQ5VT28 67 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms