RNA–Protein interactions for RNA: ENST00000629999.2

DDX49-214, Transcript of DEAD-box helicase 49, humanhuman

TSL 5 BASIC

Gene DDX49, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-214ENST00000629999 SOSTQ9BQB4 213 aa12.76□□□□□ -0.37
DDX49-214ENST00000629999 PPP1R3EQ9H7J1 279 aa12.76□□□□□ -0.37
DDX49-214ENST00000629999 TINAGQ9UJW2 476 aa12.76□□□□□ -0.37
DDX49-214ENST00000629999 MRPS7Q9Y2R9 242 aaKnown RBP12.76□□□□□ -0.37
DDX49-214ENST00000629999 MED19A0JLT2 244 aaPredicted RBP12.76□□□□□ -0.37
DDX49-214ENST00000629999 CNOT4O95628 575 aaKnown RBP12.76□□□□□ -0.37
DDX49-214ENST00000629999 CGAP01215 116 aa12.76□□□□□ -0.37
DDX49-214ENST00000629999 HCKP08631 526 aa12.76□□□□□ -0.37
DDX49-214ENST00000629999 COX5BP10606 129 aa12.76□□□□□ -0.37
DDX49-214ENST00000629999 ACKR3P25106 362 aa12.76□□□□□ -0.37
DDX49-214ENST00000629999 HOXC12P31275 282 aa12.76□□□□□ -0.37
DDX49-214ENST00000629999 APLNRP35414 380 aa12.76□□□□□ -0.37
DDX49-214ENST00000629999 ZNF92Q03936 586 aa12.76□□□□□ -0.37
DDX49-214ENST00000629999 TAB1Q15750 504 aa12.76□□□□□ -0.37
DDX49-214ENST00000629999 GABRA6Q16445 453 aa12.76□□□□□ -0.37
DDX49-214ENST00000629999 METAP1DQ6UB28 335 aaPredicted RBP12.76□□□□□ -0.37
DDX49-214ENST00000629999 DPPA2Q7Z7J5 298 aa12.76□□□□□ -0.37
DDX49-214ENST00000629999 CXorf67Q86X51 503 aaPredicted RBP12.76□□□□□ -0.37
DDX49-214ENST00000629999 GABRG1Q8N1C3 465 aa12.76□□□□□ -0.37
DDX49-214ENST00000629999 SEMA6DQ8NFY4 1073 aa12.76□□□□□ -0.37
DDX49-214ENST00000629999 FAM3DQ96BQ1 224 aa12.76□□□□□ -0.37
DDX49-214ENST00000629999 MRI1Q9BV20 369 aa12.76□□□□□ -0.37
DDX49-214ENST00000629999 C1QTNF5Q9BXJ0 243 aa12.76□□□□□ -0.37
DDX49-214ENST00000629999 MYEF2Q9P2K5 600 aaKnown RBP12.76□□□□□ -0.37
DDX49-214ENST00000629999 FUOMA2VDF0 154 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 TMEM127O75204 238 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 CELA3BP08861 270 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 CSF3P09919 207 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 IL7P13232 177 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 COX5AP20674 150 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 THBS4P35443 961 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 PITPNBP48739 271 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 RNASE12Q5GAN4 147 aaKnown RBP12.75□□□□□ -0.37
DDX49-214ENST00000629999 KRBOX4Q5JUW0 171 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 ZNF529Q6P280 563 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 RNF144BQ7Z419 303 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 DOLPP1Q86YN1 238 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 OR5AS1Q8N127 324 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 Q8N402 240 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 PAQR4Q8N4S7 273 aaPredicted RBP12.75□□□□□ -0.37
DDX49-214ENST00000629999 GDPD1Q8N9F7 314 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 POC5Q8NA72 575 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 OR4D6Q8NGJ1 314 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 OR6M1Q8NGM8 313 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 POM121L2Q96KW2 1035 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 OR51B6Q9H340 312 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 TP63Q9H3D4 680 aaPredicted RBP12.75□□□□□ -0.37
DDX49-214ENST00000629999 CNTD2Q9H8S5 307 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 ETV7Q9Y603 341 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 CACNA1AO00555 2505 aa12.75□□□□□ -0.37
DDX49-214ENST00000629999 A0A1W2PQ09 198 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 ERCC1P07992 297 aaPredicted RBP12.74□□□□□ -0.37
DDX49-214ENST00000629999 GLI4P10075 376 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 TIMP3P35625 211 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 IDH3GP51553 393 aaPredicted RBP12.74□□□□□ -0.37
DDX49-214ENST00000629999 BCAP31P51572 246 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 ART1P52961 327 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 C2orf76Q3KRA6 126 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 FAM166AQ6J272 317 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 MYPOPQ86VE0 399 aaPredicted RBP12.74□□□□□ -0.37
DDX49-214ENST00000629999 SLC30A7Q8NEW0 376 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 SLC25A28Q96A46 364 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 SORCS2Q96PQ0 1159 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 C1QTNF6Q9BXI9 259 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 IGKV1-9A0A0C4DH69 117 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 LOC100289279A0A1B0GTE1 492 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 TMEM272A0A1B0GTI8 110 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 hCG_38984A0A1B0GV85 526 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 XRCC2O43543 280 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 CRHP06850 196 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 ARSBP15848 533 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 CFPP27918 469 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 ZNF93P35789 620 aaPredicted RBP12.74□□□□□ -0.37
DDX49-214ENST00000629999 EFNB2P52799 333 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 PMPCAQ10713 525 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 EIF2S3LQ2VIR3 472 aaKnown RBP12.74□□□□□ -0.37
DDX49-214ENST00000629999 CDH26Q8IXH8 852 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 AKAP1Q92667 903 aaKnown RBP eCLIP12.74□□□□□ -0.37
DDX49-214ENST00000629999 FOXRED1Q96CU9 486 aaPredicted RBP12.74□□□□□ -0.37
DDX49-214ENST00000629999 ZFP3Q96NJ6 502 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 RGCCQ9H4X1 137 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 METTL17Q9H7H0 456 aaPredicted RBP12.74□□□□□ -0.37
DDX49-214ENST00000629999 GPR173Q9NS66 373 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 SPEF1Q9Y4P9 236 aa12.74□□□□□ -0.37
DDX49-214ENST00000629999 INTS1Q8N201 2190 aaKnown RBP12.74□□□□□ -0.37
DDX49-214ENST00000629999 LOC390937A0A1W2PQ73 354 aa12.73□□□□□ -0.37
DDX49-214ENST00000629999 AGFG2O95081 481 aa12.73□□□□□ -0.37
DDX49-214ENST00000629999 NGFP01138 241 aa12.73□□□□□ -0.37
DDX49-214ENST00000629999 SERPINA5P05154 406 aa12.73□□□□□ -0.37
DDX49-214ENST00000629999 PTBP1P26599 531 aaKnown RBP eCLIP12.73□□□□□ -0.37
DDX49-214ENST00000629999 MAP2K3P46734 347 aa12.73□□□□□ -0.37
DDX49-214ENST00000629999 GSK3AP49840 483 aa12.73□□□□□ -0.37
DDX49-214ENST00000629999 FAM3AP98173 230 aa12.73□□□□□ -0.37
DDX49-214ENST00000629999 RIPPLY1Q0D2K3 151 aa12.73□□□□□ -0.37
DDX49-214ENST00000629999 TNK1Q13470 666 aa12.73□□□□□ -0.37
DDX49-214ENST00000629999 UBE2V2Q15819 145 aa12.73□□□□□ -0.37
DDX49-214ENST00000629999 C1orf100Q5SVJ3 147 aa12.73□□□□□ -0.37
DDX49-214ENST00000629999 TRIQKQ629K1 86 aa12.73□□□□□ -0.37
DDX49-214ENST00000629999 COLCA1Q6ZS62 124 aa12.73□□□□□ -0.37
DDX49-214ENST00000629999 CCDC54Q8NEL0 328 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms