RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 DUSP13Q9UII6 198 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 SLC22A13Q9Y226 551 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 DNHD1Q96M86 4753 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 TRDV1A0A1B0GX56 115 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 A0A1W2PPW3 197 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 OR6C6A6NF89 314 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 LOC110117498-PIK3R3F6TDL0 507 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 SGCEO43556 437 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 SC5DO75845 299 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 RGS9O75916 674 aaPredicted RBP10.8□□□□□ -0.68
PNKP-217ENST00000625216 ZFPL1O95159 310 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 ZNF250P15622 560 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 PSMA1P25786 263 aaKnown RBP10.8□□□□□ -0.68
PNKP-217ENST00000625216 DCTDP32321 178 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 CX3CR1P49238 355 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 PRKXP51817 358 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 RPS11P62280 158 aaKnown RBP eCLIP10.8□□□□□ -0.68
PNKP-217ENST00000625216 GRB2P62993 217 aaKnown RBP10.8□□□□□ -0.68
PNKP-217ENST00000625216 MRPS11P82912 194 aaKnown RBP10.8□□□□□ -0.68
PNKP-217ENST00000625216 PSG4Q00888 419 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 RSPO1Q2MKA7 263 aaPredicted RBP10.8□□□□□ -0.68
PNKP-217ENST00000625216 ZNF829Q3KNS6 432 aaPredicted RBP10.8□□□□□ -0.68
PNKP-217ENST00000625216 PABPC1L2AQ5JQF8 200 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 TMEM91Q6ZNR0 172 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 RHOUQ7L0Q8 258 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.8□□□□□ -0.68
PNKP-217ENST00000625216 OR10AC1Q8NH08 325 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 SYNPRQ8TBG9 265 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 SLC7A6Q92536 515 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 GHSRQ92847 366 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 SYT3Q9BQG1 590 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 HDHD2Q9H0R4 259 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 TXNL4BQ9NX01 149 aaKnown RBP10.8□□□□□ -0.68
PNKP-217ENST00000625216 EIF3KQ9UBQ5 218 aaKnown RBP10.8□□□□□ -0.68
PNKP-217ENST00000625216 LPAR3Q9UBY5 353 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 SSR3Q9UNL2 185 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 GTF2A1LQ9UNN4 478 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 TIMM10BQ9Y5J6 103 aa10.8□□□□□ -0.68
PNKP-217ENST00000625216 IGLV3-9A0A075B6K5 115 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 IGHV4-61A0A0C4DH41 118 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 KIAA1324LA8MWY0 1029 aaPredicted RBP10.79□□□□□ -0.68
PNKP-217ENST00000625216 SLC22A1O15245 554 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 LMX1BO60663 402 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 DBHP09172 617 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 FAM157BP0CG42 384 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 SLC2A1P11166 492 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 CCL2P13500 99 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 STOMP27105 288 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 APEX1P27695 318 aaKnown RBP10.79□□□□□ -0.68
PNKP-217ENST00000625216 HSD11B1P28845 292 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 OTX1P32242 354 aaPredicted RBP10.79□□□□□ -0.68
PNKP-217ENST00000625216 ALDH3B1P43353 468 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 MMP16P51512 607 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 CCR9P51686 369 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 KLF3P57682 345 aaPredicted RBP10.79□□□□□ -0.68
PNKP-217ENST00000625216 ZNF121P58317 390 aaPredicted RBP10.79□□□□□ -0.68
PNKP-217ENST00000625216 RIN1Q13671 783 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 TAF13Q15543 124 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 KRTAP27-1Q3LI81 207 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 C22orf42Q6IC83 251 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 FAM166AQ6J272 317 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 GDPGP1Q6ZNW5 385 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 LRP11Q86VZ4 500 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 PAQR4Q8N4S7 273 aaPredicted RBP10.79□□□□□ -0.68
PNKP-217ENST00000625216 ZNF283Q8N7M2 679 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 CPEB3Q8NE35 698 aaKnown RBP10.79□□□□□ -0.68
PNKP-217ENST00000625216 OR1F12Q8NHA8 337 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 RDH5Q92781 318 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 HPS1Q92902 700 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 POM121L2Q96KW2 1035 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 KCNJ15Q99712 375 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 COQ7Q99807 217 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 DCUN1D5Q9BTE7 237 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 TPK1Q9H3S4 243 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 NIPAL2Q9H841 368 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 BRD7Q9NPI1 651 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 OR52A1Q9UKL2 312 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 KCNS2Q9ULS6 477 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 CR1P17927 2039 aa10.79□□□□□ -0.68
PNKP-217ENST00000625216 TRBV5-5A0A0J9YX44 114 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 LOC100289279A0A1B0GTE1 492 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 TMEM269A0A1B0GVZ9 245 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 SHISA3A0PJX4 238 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 C5orf63A6NC05 138 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 TMEM212A6NML5 194 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 TTRP02766 147 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 HLA-DPB1P04440 258 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 FAM157CP0CG43 387 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 GALP22466 123 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 FGF9P31371 208 aaPredicted RBP10.78□□□□□ -0.68
PNKP-217ENST00000625216 MAGEB1P43366 347 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 HTR5AP47898 357 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 TMEM33P57088 247 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 TRAM1Q15629 374 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 NKPD1Q17RQ9 610 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 ODF4Q2M2E3 257 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 PCGF3Q3KNV8 242 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 FAM27D1Q5T7N8 215 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 BCL2L15Q5TBC7 163 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 PRSS45Q7RTY3 260 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms