RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 ZNF878C9JN71 531 aa13.77□□□□□ -0.21
CD40-207ENST00000620709 H2BFMP0C1H6 154 aa13.77□□□□□ -0.21
CD40-207ENST00000620709 GIFP27352 417 aa13.77□□□□□ -0.21
CD40-207ENST00000620709 OPRL1P41146 370 aa13.77□□□□□ -0.21
CD40-207ENST00000620709 LSAMPQ13449 338 aa13.77□□□□□ -0.21
CD40-207ENST00000620709 FDX2Q6P4F2 183 aa13.77□□□□□ -0.21
CD40-207ENST00000620709 CFAP77Q6ZQR2 320 aa13.77□□□□□ -0.21
CD40-207ENST00000620709 RHOUQ7L0Q8 258 aa13.77□□□□□ -0.21
CD40-207ENST00000620709 SLC16A14Q7RTX9 510 aa13.77□□□□□ -0.21
CD40-207ENST00000620709 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.77□□□□□ -0.21
CD40-207ENST00000620709 SLC30A7Q8NEW0 376 aa13.77□□□□□ -0.21
CD40-207ENST00000620709 OR2G2Q8NGZ5 317 aa13.77□□□□□ -0.21
CD40-207ENST00000620709 MS4A5Q9H3V2 200 aa13.77□□□□□ -0.21
CD40-207ENST00000620709 NARFLQ9H6Q4 476 aa13.77□□□□□ -0.21
CD40-207ENST00000620709 SIAEQ9HAT2 523 aa13.77□□□□□ -0.21
CD40-207ENST00000620709 CDH20Q9HBT6 801 aa13.77□□□□□ -0.21
CD40-207ENST00000620709 CENPMQ9NSP4 180 aa13.77□□□□□ -0.21
CD40-207ENST00000620709 CCDC59Q9P031 241 aaKnown RBP13.77□□□□□ -0.21
CD40-207ENST00000620709 MYEF2Q9P2K5 600 aaKnown RBP13.77□□□□□ -0.21
CD40-207ENST00000620709 SERPINA5P05154 406 aa13.76□□□□□ -0.21
CD40-207ENST00000620709 NAT2P11245 290 aa13.76□□□□□ -0.21
CD40-207ENST00000620709 EVX1P49640 407 aa13.76□□□□□ -0.21
CD40-207ENST00000620709 NANOS3P60323 173 aaKnown RBP13.76□□□□□ -0.21
CD40-207ENST00000620709 ENDOGQ14249 297 aaKnown RBP13.76□□□□□ -0.21
CD40-207ENST00000620709 CR1LQ2VPA4 569 aa13.76□□□□□ -0.21
CD40-207ENST00000620709 ZNF829Q3KNS6 432 aaPredicted RBP13.76□□□□□ -0.21
CD40-207ENST00000620709 NRN1LQ496H8 165 aa13.76□□□□□ -0.21
CD40-207ENST00000620709 FAM27BQ5VT28 67 aa13.76□□□□□ -0.21
CD40-207ENST00000620709 TMEM91Q6ZNR0 172 aa13.76□□□□□ -0.21
CD40-207ENST00000620709 ZNF584Q8IVC4 421 aa13.76□□□□□ -0.21
CD40-207ENST00000620709 LRRC18Q8N456 261 aa13.76□□□□□ -0.21
CD40-207ENST00000620709 GJC3Q8NFK1 279 aa13.76□□□□□ -0.21
CD40-207ENST00000620709 ABHD4Q8TB40 342 aa13.76□□□□□ -0.21
CD40-207ENST00000620709 C4orf45Q96LM5 186 aa13.76□□□□□ -0.21
CD40-207ENST00000620709 DCLRE1CQ96SD1 692 aaKnown RBP13.76□□□□□ -0.21
CD40-207ENST00000620709 PDCD1LG2Q9BQ51 273 aa13.76□□□□□ -0.21
CD40-207ENST00000620709 COMMD4Q9H0A8 199 aa13.76□□□□□ -0.21
CD40-207ENST00000620709 FRRS1LQ9P0K9 344 aa13.76□□□□□ -0.21
CD40-207ENST00000620709 ZNF281Q9Y2X9 895 aa13.76□□□□□ -0.21
CD40-207ENST00000620709 R4GMQ9 66 aa13.76□□□□□ -0.21
CD40-207ENST00000620709 TMEM212A6NML5 194 aa13.75□□□□□ -0.21
CD40-207ENST00000620709 LILRA1O75019 489 aa13.75□□□□□ -0.21
CD40-207ENST00000620709 CST2P09228 141 aa13.75□□□□□ -0.21
CD40-207ENST00000620709 DCTDP32321 178 aa13.75□□□□□ -0.21
CD40-207ENST00000620709 CCR9P51686 369 aa13.75□□□□□ -0.21
CD40-207ENST00000620709 NKPD1Q17RQ9 610 aa13.75□□□□□ -0.21
CD40-207ENST00000620709 SLC36A2Q495M3 483 aa13.75□□□□□ -0.21
CD40-207ENST00000620709 YIF1BQ5BJH7 314 aa13.75□□□□□ -0.21
CD40-207ENST00000620709 RGS7BPQ6MZT1 257 aaPredicted RBP13.75□□□□□ -0.21
CD40-207ENST00000620709 OR10S1Q8NGN2 331 aa13.75□□□□□ -0.21
CD40-207ENST00000620709 OR5AK2Q8NH90 309 aa13.75□□□□□ -0.21
CD40-207ENST00000620709 NIPAL2Q9H841 368 aa13.75□□□□□ -0.21
CD40-207ENST00000620709 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.75□□□□□ -0.21
CD40-207ENST00000620709 RER1O15258 196 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 SC5DO75845 299 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 GATBO75879 557 aaKnown RBP13.74□□□□□ -0.21
CD40-207ENST00000620709 ZFPL1O95159 310 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 IL1AP01583 271 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 HPXP02790 462 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 CCNOP22674 350 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 COL8A2P25067 703 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 SOX6P35712 828 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 SRP14P37108 136 aaKnown RBP13.74□□□□□ -0.21
CD40-207ENST00000620709 SELENOVP59797 346 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 GRB2P62993 217 aaKnown RBP13.74□□□□□ -0.21
CD40-207ENST00000620709 PLP2Q04941 152 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 RIN1Q13671 783 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 INSL4Q14641 139 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 TAF13Q15543 124 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 TBC1D28Q2M2D7 210 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 WDR38Q5JTN6 314 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 ELFN2Q5R3F8 820 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 PAQR4Q8N4S7 273 aaPredicted RBP13.74□□□□□ -0.21
CD40-207ENST00000620709 LINC01356Q8N9X3 169 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 PNRC2Q9NPJ4 139 aaKnown RBP13.74□□□□□ -0.21
CD40-207ENST00000620709 TAAR3PQ9P1P4 343 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 IQCMA0A1B0GVH7 501 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 OR4C45A6NMZ5 311 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 LOC110117498-PIK3R3F6TDL0 507 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 SRSF10O75494 262 aaKnown RBP13.74□□□□□ -0.21
CD40-207ENST00000620709 CLPXO76031 633 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 CDRT1O95170 752 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 HSD11B1P28845 292 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 KIR3DL2P43630 455 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 GPR6P46095 362 aaPredicted RBP13.74□□□□□ -0.21
CD40-207ENST00000620709 HIST1H3AP68431 136 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 MFGE8Q08431 387 aaPredicted RBP13.74□□□□□ -0.21
CD40-207ENST00000620709 SCRN3Q0VDG4 424 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 ACSM3Q53FZ2 586 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 HIST2H3PS2Q5TEC6 136 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 HIST2H3AQ71DI3 136 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 CEACAM19Q7Z692 300 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 CATSPERDQ86XM0 798 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 PRSS35Q8N3Z0 413 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 ZNF676Q8N7Q3 588 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 PHYHIPQ92561 330 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 WACQ9BTA9 647 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 GTF2A1LQ9UNN4 478 aa13.74□□□□□ -0.21
CD40-207ENST00000620709 TMEM269A0A1B0GVZ9 245 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 PPIHO43447 177 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms