RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 OR5K4A6NMS3 321 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 M0QZ24 198 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 NPSP0C0P6 89 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 BCL6P41182 706 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 AMTP48728 403 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 FAM71E1Q6IPT2 247 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 JMJD6Q6NYC1 403 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-214ENST00000620676 SLC43A2Q8N370 569 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 UBTD2Q8WUN7 234 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 PITPNC1Q9UKF7 332 aa4.54□□□□□ -1.68
VPS13D-214ENST00000620676 TRAV1-2A0A0B4J238 106 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 OR4C46A6NHA9 309 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 ZBTB42B2RXF5 422 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 STC2O76061 302 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 NPPBP16860 134 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 PPP1CBP62140 327 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 HERPUD1Q15011 391 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 EOGTQ5NDL2 527 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 LFNGQ8NES3 379 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 OR4D11Q8NGI4 311 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 WNT10AQ9GZT5 417 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 OR2D2Q9H210 308 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 DEC1Q9P2X7 70 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 HCSTQ9UBK5 93 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 MTFP1Q9UDX5 166 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 LMO7Q8WWI1 1683 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 OR7C2O60412 319 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 SNAI1O95863 264 aaPredicted RBP4.53□□□□□ -1.68
VPS13D-214ENST00000620676 ERN2Q76MJ5 926 aaKnown RBP4.53□□□□□ -1.68
VPS13D-214ENST00000620676 DCXRQ7Z4W1 244 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 COA3Q9Y2R0 106 aaPredicted RBP4.53□□□□□ -1.68
VPS13D-214ENST00000620676 SLC24A5Q71RS6 500 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 OR5D13Q8NGL4 314 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF840PA6NDX5 716 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 UBE3DQ7Z6J8 389 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM229BQ8NBD8 167 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 WDR92Q96MX6 357 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 LSM2Q9Y333 95 aaKnown RBP4.53□□□□□ -1.68
VPS13D-214ENST00000620676 E5RGE8 158 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 ZNHIT1O43257 154 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 ADH5P11766 374 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 SLC25A4P12235 298 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 DYNLT3P51808 116 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 KCNG3Q8TAE7 436 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 BLNKQ8WV28 456 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 KCNIP1Q9NZI2 227 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 NSG2Q9Y328 171 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 G3V3Y1 287 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 WNT3P56703 355 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF805Q5CZA5 627 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 DHRS11Q6UWP2 260 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 KLHDC1Q8N7A1 406 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 ACY3Q96HD9 319 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 PRSS16Q9NQE7 514 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 IL17CQ9P0M4 197 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 TP53TG5Q9Y2B4 290 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 M0R2Z0 102 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 EREGO14944 169 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 CCR2P41597 374 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 PRPS1P60891 318 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 IFI44Q8TCB0 444 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 WFDC6Q9BQY6 131 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 GAGE10A6NGK3 116 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 CDC42EP2O14613 210 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 CNIH1O95406 144 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM25Q86YD3 366 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF485Q8NCK3 441 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 PSENENQ9NZ42 101 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 HHLA2Q9UM44 414 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 OR51B4Q9Y5P0 310 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 NKX2-6A6NCS4 301 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 CTAG2O75638 210 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 EDDM3BP56851 147 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 RAB35Q15286 201 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 MAMDC2Q7Z304 686 aaPredicted RBP4.53□□□□□ -1.68
VPS13D-214ENST00000620676 DTWD2Q8NBA8 298 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 ZFYVE21Q9BQ24 234 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 NECAP2Q9NVZ3 263 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 HILPDAQ9Y5L2 63 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 PRSS35Q8N3Z0 413 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 MOB1AQ9H8S9 216 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 OR4C45A6NMZ5 311 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 MFNGO00587 321 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 PRLHRP49683 370 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 SGCBQ16585 318 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 LDLRAD2Q5SZI1 272 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 THEM4Q5T1C6 240 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 ADAMTS5Q9UNA0 930 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 GPR34Q9UPC5 381 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 PIGBOS1A0A0B4J2F0 54 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 A0A1W2PRD5 423 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 A0A1W2PRF3 423 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 A0A1W2PRM7 423 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 K7ESM1 405 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 UNQ6494/PRO21346Q6UXR6 183 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 SRD5A3Q9H8P0 318 aa4.53□□□□□ -1.68
VPS13D-214ENST00000620676 HOXB3P14651 431 aaPredicted RBP4.53□□□□□ -1.69
VPS13D-214ENST00000620676 ACKR3P25106 362 aa4.53□□□□□ -1.69
VPS13D-214ENST00000620676 THSD4Q6ZMP0 1018 aa4.53□□□□□ -1.69
VPS13D-214ENST00000620676 OR5AS1Q8N127 324 aa4.53□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms