RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 NEURL1O76050 574 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 SERPINA2P20848 420 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 MAGEA5P43359 124 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 LSM6P62312 80 aaKnown RBP10.89□□□□□ -0.67
CIITA-212ENST00000618207 ZNF239Q16600 458 aaKnown RBP10.89□□□□□ -0.67
CIITA-212ENST00000618207 LGALSLQ3ZCW2 172 aaPredicted RBP10.89□□□□□ -0.67
CIITA-212ENST00000618207 FGFBP3Q8TAT2 258 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 SLC6A7Q99884 636 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 SLC6A15Q9H2J7 730 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 SLC17A5Q9NRA2 495 aa10.89□□□□□ -0.67
CIITA-212ENST00000618207 ZFHX2Q9C0A1 2572 aaPredicted RBP10.89□□□□□ -0.67
CIITA-212ENST00000618207 RP1L1Q8IWN7 2480 aaPredicted RBP10.88□□□□□ -0.67
CIITA-212ENST00000618207 TTLL8A6PVC2 850 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 GOSR2O14653 212 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 NR2C1P13056 603 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 CXADRP78310 365 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 S100A12P80511 92 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 ZNF260Q3ZCT1 412 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 DCAF10Q5QP82 559 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 PLA2G2CQ5R387 149 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 ZNF626Q68DY1 528 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 LIN54Q6MZP7 749 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 DOK3Q7L591 496 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 LIX1LQ8IVB5 337 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 BATF2Q8N1L9 274 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 OR14K1Q8NGZ2 314 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 OR2V1Q8NHB1 315 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 MAFIPQ8WZ33 124 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 PNPLA2Q96AD5 504 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 SGK3Q96BR1 496 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 GON7Q9BXV9 100 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 MOB1AQ9H8S9 216 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 IFT46Q9NQC8 304 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 A0A0A6YYD4 124 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 UBE2QL1A1L167 161 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 SGCEO43556 437 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 LCATP04180 440 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 ZNF32P17041 273 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 CCNOP22674 350 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 CFPP27918 469 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 OR3A3P47888 321 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 FOXO1Q12778 655 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 OR1C1Q15619 314 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 UBE2V2Q15819 145 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 C10orf128Q5T292 105 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 GALNTL5Q7Z4T8 443 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 UTP23Q9BRU9 249 aaKnown RBP10.88□□□□□ -0.67
CIITA-212ENST00000618207 ZPBPQ9BS86 351 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 SPRY4Q9C004 299 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 NPDC1Q9NQX5 325 aaPredicted RBP10.88□□□□□ -0.67
CIITA-212ENST00000618207 SCP2D1Q9UJQ7 156 aa10.88□□□□□ -0.67
CIITA-212ENST00000618207 A0A096LPE4 126 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 A0A1W2PPZ6 126 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 ZNF716A6NP11 495 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 PMP2P02689 132 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 FCGR2AP12318 317 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 HRH1P35367 487 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 PLGLB1Q02325 96 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 HGFACQ04756 655 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 KCNMB1Q16558 191 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 DCAF12L2Q5VW00 463 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 SULF2Q8IWU5 870 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 C20orf196Q8IYI0 205 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 OR2M7Q8NG81 312 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 DDA1Q9BW61 102 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 TMEM59Q9BXS4 323 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 CALHM2Q9HA72 323 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 GPR173Q9NS66 373 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 KCNK7Q9Y2U2 307 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 PRR14LQ5THK1 2151 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 TMEM82A0PJX8 343 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 G3V3Q6 166 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 BPNT1O95861 308 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 CNR1P21554 472 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 H2BFSP57053 126 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 QRFPP83859 136 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 KISS1Q15726 138 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 RNASE10Q5GAN6 216 aaKnown RBP10.87□□□□□ -0.67
CIITA-212ENST00000618207 LPAR5Q9H1C0 372 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 TMEM9BQ9NQ34 198 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 CEP250Q9BV73 2442 aa10.87□□□□□ -0.67
CIITA-212ENST00000618207 ERCC1P07992 297 aaPredicted RBP10.86□□□□□ -0.67
CIITA-212ENST00000618207 ZNF35P13682 527 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 HTR5AP47898 357 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 POU4F3Q15319 338 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 H3F3CQ6NXT2 135 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 SLC36A1Q7Z2H8 476 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 OR8H3Q8N146 312 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 OR10R2Q8NGX6 335 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 KCNE4Q8WWG9 221 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 FOXB1Q99853 325 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 PIPOXQ9P0Z9 390 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 BOKQ9UMX3 212 aaPredicted RBP10.86□□□□□ -0.67
CIITA-212ENST00000618207 FAM230AA0A1W2PPH8 454 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 ERVH48-1M5A8F1 160 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 ANGPTL7O43827 346 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 CDC14BO60729 498 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 CCL2P13500 99 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 SPINK2P20155 84 aa10.86□□□□□ -0.67
CIITA-212ENST00000618207 ACKR3P25106 362 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms