RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 C9J4A7 227 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 PRNPP04156 253 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 HOXC4P09017 264 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 FCARP24071 287 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 NKX2-1P43699 371 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 ATP6V1FQ16864 119 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 CCDC71LQ8N9Z2 235 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 DMBX1Q8NFW5 382 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 EMG1Q92979 244 aaKnown RBP12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 ATP5SQ99766 215 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 TBL1XR1Q9BZK7 514 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 NKX2-4Q9H2Z4 354 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 PADI1Q9ULC6 663 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 YIPF1Q9Y548 306 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 RGPD3A6NKT7 1758 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 RGPD4Q7Z3J3 1758 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 BRCA1P38398 1863 aaKnown RBP12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 RAB29O14966 203 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 TGM5O43548 720 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 TBPP20226 339 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 CHRNA7P36544 502 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 TRA2BP62995 288 aaKnown RBP12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 FZD2Q14332 565 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 TMEM64Q6YI46 380 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 TAAR9Q96RI9 348 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 ZNF442Q9H7R0 627 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 PHPT1Q9NRX4 125 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 HMGB3O15347 200 aaKnown RBP12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 IGHV2-5P01817 119 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 PMCHP20382 165 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 ACAA2P42765 397 aaKnown RBP12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 FGF8P55075 233 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 JOSD1Q15040 202 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 PRR27Q6MZM9 219 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 SLC48A1Q6P1K1 146 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 OR5L2Q8NGL0 311 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 PRDM13Q9H4Q3 707 aa12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 LYRM2Q9NU23 88 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3B-205ENST00000616288 PRAMEF27A3QJZ7 478 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 HSBP1L1C9JCN9 74 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 C9JQL5 133 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 EIF4E2O60573 245 aaKnown RBP12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 TMEM127O75204 238 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 ONECUT2O95948 504 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 GABRA4P48169 554 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 TRA2AQ13595 282 aaKnown RBP eCLIP12.15□□□□□ -0.462e-10■■■■■ 45.6
PPP4R3B-205ENST00000616288 SLC17A1Q14916 467 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 TMEM183AQ8IXX5 376 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 ZNF738Q8NE65 137 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 OR4F5Q8NH21 305 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 KCNG3Q8TAE7 436 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 CMTM2Q8TAZ6 248 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 OR4F4Q96R69 305 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 FAM24AA6NFZ4 105 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 EFSO43281 561 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 ADRA2CP18825 462 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 DUSP1P28562 367 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 SPRYD7Q5W111 196 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 ZNF683Q8IZ20 524 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 OR2L13Q8N349 312 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 LHX4Q969G2 390 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 ADIPOR1Q96A54 375 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 SMIM8Q96KF7 97 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 OR10C1Q96KK4 312 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 VN1R1Q9GZP7 353 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 WWTR1Q9GZV5 400 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 KLK13Q9UKR3 277 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 TOX4O94842 621 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 F11P03951 625 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 CPMP14384 443 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 IL12BP29460 328 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 ARL4DP49703 201 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 HSD11B2P80365 405 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 GRINAQ7Z429 371 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 DEFB128Q7Z7B8 93 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 GNPNAT1Q96EK6 184 aaPredicted RBP12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 SPACA7Q96KW9 195 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 SNHG12Q9BXW3 62 aa12.15□□□□□ -0.46
PPP4R3B-205ENST00000616288 A0A1W2PPC1 479 aa12.15□□□□□ -0.47
PPP4R3B-205ENST00000616288 PSMB3P49720 205 aa12.15□□□□□ -0.47
PPP4R3B-205ENST00000616288 OR51A2Q8NGJ7 313 aa12.15□□□□□ -0.47
PPP4R3B-205ENST00000616288 OR5B2Q96R09 309 aa12.15□□□□□ -0.47
PPP4R3B-205ENST00000616288 TLCD2A6NGC4 264 aa12.14□□□□□ -0.47
PPP4R3B-205ENST00000616288 A8MWP6 167 aa12.14□□□□□ -0.47
PPP4R3B-205ENST00000616288 HPRT1P00492 218 aa12.14□□□□□ -0.47
PPP4R3B-205ENST00000616288 CXCL1P09341 107 aa12.14□□□□□ -0.47
PPP4R3B-205ENST00000616288 OR5G3P0C626 314 aa12.14□□□□□ -0.47
PPP4R3B-205ENST00000616288 RAB38P57729 211 aa12.14□□□□□ -0.47
PPP4R3B-205ENST00000616288 OR5R1Q8NH85 324 aa12.14□□□□□ -0.47
PPP4R3B-205ENST00000616288 NTNG2Q96CW9 530 aa12.14□□□□□ -0.47
PPP4R3B-205ENST00000616288 MRM2Q9UI43 246 aaKnown RBP12.14□□□□□ -0.47
PPP4R3B-205ENST00000616288 OTOFQ9HC10 1997 aa12.14□□□□□ -0.47
PPP4R3B-205ENST00000616288 MDFIC2A0A1B0GVS7 189 aa12.14□□□□□ -0.47
PPP4R3B-205ENST00000616288 K7ERU9 68 aa12.14□□□□□ -0.47
PPP4R3B-205ENST00000616288 NUDT21O43809 227 aaKnown RBP12.14□□□□□ -0.47
PPP4R3B-205ENST00000616288 OPRM1P35372 400 aa12.14□□□□□ -0.47
PPP4R3B-205ENST00000616288 GABRA2P47869 451 aa12.14□□□□□ -0.47
PPP4R3B-205ENST00000616288 PIGPP57054 158 aa12.14□□□□□ -0.47
PPP4R3B-205ENST00000616288 SLC7A9P82251 487 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms