RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 A0A087X0M5 115 aa16.97■□□□□ 0.31
SPAST-203ENST00000615843 A0A1B0GX30 115 aa16.97■□□□□ 0.31
SPAST-203ENST00000615843 CHEK1O14757 476 aa16.97■□□□□ 0.31
SPAST-203ENST00000615843 SLC25A6P12236 298 aa16.97■□□□□ 0.31
SPAST-203ENST00000615843 SHBQ15464 509 aa16.97■□□□□ 0.31
SPAST-203ENST00000615843 FBXL17Q9UF56 701 aa16.97■□□□□ 0.31
SPAST-203ENST00000615843 GRPP07492 148 aa16.97■□□□□ 0.31
SPAST-203ENST00000615843 DMRTC1Q5HYR2 192 aa16.97■□□□□ 0.31
SPAST-203ENST00000615843 SLC17A4Q9Y2C5 497 aa16.97■□□□□ 0.31
SPAST-203ENST00000615843 GTF2H5Q6ZYL4 71 aa16.97■□□□□ 0.31
SPAST-203ENST00000615843 ISOC2Q96AB3 205 aa16.97■□□□□ 0.31
SPAST-203ENST00000615843 TIMM10BQ9Y5J6 103 aa16.97■□□□□ 0.31
SPAST-203ENST00000615843 ENSAO43768 121 aaKnown RBP16.97■□□□□ 0.31
SPAST-203ENST00000615843 CRYBA1P05813 215 aa16.97■□□□□ 0.31
SPAST-203ENST00000615843 ABCD3P28288 659 aa16.97■□□□□ 0.31
SPAST-203ENST00000615843 TAS2R45P59539 299 aa16.97■□□□□ 0.31
SPAST-203ENST00000615843 UBE2G2P60604 165 aa16.97■□□□□ 0.31
SPAST-203ENST00000615843 RPL7L1Q6DKI1 246 aaKnown RBP16.97■□□□□ 0.31
SPAST-203ENST00000615843 DMKNQ6E0U4 476 aaPredicted RBP16.97■□□□□ 0.31
SPAST-203ENST00000615843 Q7L0L9 218 aa16.97■□□□□ 0.31
SPAST-203ENST00000615843 NAT6Q93015 286 aa16.97■□□□□ 0.31
SPAST-203ENST00000615843 CIB3Q96Q77 187 aaPredicted RBP16.97■□□□□ 0.31
SPAST-203ENST00000615843 TRBV5-3A0A0A0MS03 114 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 ARG1P05089 322 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 GLRA1P23415 457 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 SLC37A1P57057 533 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 COTL1Q14019 142 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 TUSC1Q2TAM9 212 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 USB1Q9BQ65 265 aaKnown RBP16.96■□□□□ 0.31
SPAST-203ENST00000615843 ANKRD36CQ5JPF3 1778 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 CLEC18AA5D8T8 446 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 K7EQM0 130 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 MMP7P09237 267 aaPredicted RBP16.96■□□□□ 0.31
SPAST-203ENST00000615843 S100A7P31151 101 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 UBE3DQ7Z6J8 389 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 CLEC18CQ8NCF0 446 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 PINX1Q96BK5 328 aaKnown RBP16.96■□□□□ 0.31
SPAST-203ENST00000615843 HIST1H3AP68431 136 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 CORO2AQ92828 525 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 KIF13AQ9H1H9 1805 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 ARPC3O15145 178 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 ONECUT2O95948 504 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 GP1BAP07359 652 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 HIST1H1DP16402 221 aaKnown RBP16.96■□□□□ 0.31
SPAST-203ENST00000615843 ZG16BQ96DA0 208 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 RTL8AQ9BWD3 113 aa16.96■□□□□ 0.31
SPAST-203ENST00000615843 ELOA3CA0A087WX78 387 aaPredicted RBP16.95■□□□□ 0.3
SPAST-203ENST00000615843 ERVH48-1M5A8F1 160 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 CD200P41217 278 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 GALR1P47211 349 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 OSR2Q8N2R0 312 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 PRDM7Q9NQW5 492 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 PPP1R14DQ9NXH3 145 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 AQP7P3A6NL99 342 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 LAMTOR5O43504 91 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 IGHV3-9P01782 118 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 ST6GAL1P15907 406 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 PMS2P11Q13670 270 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 RAB35Q15286 201 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 PWWP2BQ6NUJ5 590 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 OR11L1Q8NGX0 322 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 PATE1Q8WXA2 126 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 FER1L6Q2WGJ9 1857 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 IGLV3-16A0A075B6K0 115 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 PRRT4C9JH25 899 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 PPIAP62937 165 aaKnown RBP16.95■□□□□ 0.3
SPAST-203ENST00000615843 HTRA3P83110 453 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 IFITM2Q01629 132 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 ZNF468Q5VIY5 522 aaPredicted RBP16.95■□□□□ 0.3
SPAST-203ENST00000615843 THSD4Q6ZMP0 1018 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 OR4D9Q8NGE8 314 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 CHAC2Q8WUX2 184 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 KTI12Q96EK9 354 aaPredicted RBP16.95■□□□□ 0.3
SPAST-203ENST00000615843 MS4A10Q96PG2 267 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 LYRM2Q9NU23 88 aaPredicted RBP16.95■□□□□ 0.3
SPAST-203ENST00000615843 LPAR3Q9UBY5 353 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 MED19A0JLT2 244 aaPredicted RBP16.95■□□□□ 0.3
SPAST-203ENST00000615843 H0Y8X5 98 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 CST2P09228 141 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 ADPRHP54922 357 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 Q6ZNB5 142 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 ZNF596Q8TC21 504 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 ARHGAP5-AS1Q96IT6 56 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 SLC35E1Q96K37 410 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 TMED3Q9Y3Q3 217 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 HS3ST3A1Q9Y663 406 aa16.95■□□□□ 0.3
SPAST-203ENST00000615843 A0A1B0GTH9 108 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 HSBP1O75506 76 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 FAHP16930 419 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 OXGR1Q96P68 337 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 C4orf47A7E2U8 309 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 CDC42EP2O14613 210 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 PMCHP20382 165 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 NUBPLQ8TB37 319 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 BCL7CQ8WUZ0 217 aaPredicted RBP16.94■□□□□ 0.3
SPAST-203ENST00000615843 MMP25Q9NPA2 562 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 UBE2L5PA0A1B0GUS4 154 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 OR7C2O60412 319 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 C21orf58P58505 322 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 ZNF793Q6ZN11 406 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms