RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 OR51H1Q8NH63 302 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 REEP6Q96HR9 211 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 NDRG3Q9UGV2 375 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 LHX6Q9UPM6 363 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 A0A0U1RQK1 487 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 UMAD1C9J7I0 102 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 ERVH48-1M5A8F1 160 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 RER1O15258 196 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 CLDN1O95832 211 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 HLA-DQB1P01920 261 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 CD37P11049 281 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 AADACP22760 399 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 ATPAF1Q5TC12 328 aaPredicted RBP11.12□□□□□ -0.63
CDH1-212ENST00000611625 TMEM268Q5VZI3 342 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 GVQW1Q8N7I0 195 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 LINC00052Q96N35 136 aa11.12□□□□□ -0.63
CDH1-212ENST00000611625 IGHV1OR21-1A0A087WYE8 117 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 XRCC2O43543 280 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 CXCL13O43927 109 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 TMIGD3P0DMS9 266 aaPredicted RBP11.11□□□□□ -0.63
CDH1-212ENST00000611625 BPHLQ86WA6 291 aaPredicted RBP11.11□□□□□ -0.63
CDH1-212ENST00000611625 CNEP1R1Q8N9A8 125 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 TM4SF19Q96DZ7 209 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 PGLYRP3Q96LB9 341 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 SSX3Q99909 188 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 RHOFQ9HBH0 211 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 SLCO1B1Q9Y6L6 691 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 A0A087WZY1 265 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 DCTN6O00399 190 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 MT-CO2P00403 227 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 TAS2R30P59541 319 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 HNF4GQ14541 408 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 EIF2S3LQ2VIR3 472 aaKnown RBP11.11□□□□□ -0.63
CDH1-212ENST00000611625 RBMS3Q6XE24 437 aaKnown RBP11.11□□□□□ -0.63
CDH1-212ENST00000611625 BPIFCQ8NFQ6 507 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 SLC39A9Q9NUM3 307 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 STRAPQ9Y3F4 350 aaKnown RBP11.11□□□□□ -0.63
CDH1-212ENST00000611625 ANGPTL7O43827 346 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 DUS4LO95620 317 aaKnown RBP11.11□□□□□ -0.63
CDH1-212ENST00000611625 IGKV1D-16P01601 117 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 RPP30P78346 268 aaKnown RBP11.11□□□□□ -0.63
CDH1-212ENST00000611625 TRIM61Q5EBN2 209 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 SP7Q8TDD2 431 aaPredicted RBP11.11□□□□□ -0.63
CDH1-212ENST00000611625 PHYHIPLQ96FC7 376 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 PATJQ8NI35 1801 aa11.11□□□□□ -0.63
CDH1-212ENST00000611625 NXPH2O95156 264 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 CD1AP06126 327 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 CD46P15529 392 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 SLC37A1P57057 533 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 LINC00696Q6ZRV3 163 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 AK3Q9UIJ7 227 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 FAM186AA6NE01 2351 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 B3GALNT1O75752 331 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 CTXN2P0C2S0 81 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 ANKRD34CP0C6C1 535 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 KISS1Q15726 138 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 DGAT2L6Q6ZPD8 337 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 MRGPREQ86SM8 312 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 OR10G3Q8NGC4 313 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 FN3KRPQ9HA64 309 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 RAB18Q9NP72 206 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 ST3GAL6Q9Y274 331 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 TUSC2O75896 110 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 SFT2D2O95562 160 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 IFNA10P01566 189 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 IL34Q6ZMJ4 242 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 APH1AQ96BI3 265 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 C1QTNF6Q9BXI9 259 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 CA10Q9NS85 328 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 GREB1Q4ZG55 1949 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 GP1BAP07359 652 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 IRF2P14316 349 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 B4GALT1P15291 398 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 RAB4BP61018 213 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 KIAA0141Q14154 515 aaPredicted RBP11.1□□□□□ -0.63
CDH1-212ENST00000611625 RPUSD3Q6P087 351 aaKnown RBP11.1□□□□□ -0.63
CDH1-212ENST00000611625 SFTPA2Q8IWL1 248 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 ZNF321PQ8N8H1 164 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 INTS12Q96CB8 462 aaKnown RBP11.1□□□□□ -0.63
CDH1-212ENST00000611625 ZNF75AQ96N20 296 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 URGCP-MRPS24S4R325 110 aa11.1□□□□□ -0.63
CDH1-212ENST00000611625 A0A1W2PQD3 144 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 A0A1W2PQF6 199 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 TTLL8A6PVC2 850 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 ZNF724A8MTY0 619 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 SERPINA7P05543 415 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 SLC25A26Q70HW3 274 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 OR10J5Q8NHC4 309 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 IFI44Q8TCB0 444 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 ARL5BQ96KC2 179 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 PLEKHF2Q9H8W4 249 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 RAB9BQ9NP90 201 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 KLHDC2Q9Y2U9 406 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 TCRBV16S1A1N1A0A5B0 115 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 ZFP92A6NM28 416 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 FOXS1O43638 330 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 GALNSP34059 522 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 EFNB2P52799 333 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 PDLIM3Q53GG5 364 aaPredicted RBP11.09□□□□□ -0.63
CDH1-212ENST00000611625 Q7L0L9 218 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms