RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 MESP1Q9BRJ9 268 aa13.36□□□□□ -0.27
PCDHGB1-202ENST00000611598 RNF122Q9H9V4 155 aa13.36□□□□□ -0.27
PCDHGB1-202ENST00000611598 PIAS3Q9Y6X2 628 aa13.36□□□□□ -0.27
PCDHGB1-202ENST00000611598 EPOPA6NHQ4 379 aa13.36□□□□□ -0.27
PCDHGB1-202ENST00000611598 METTL12A8MUP2 240 aa13.36□□□□□ -0.27
PCDHGB1-202ENST00000611598 MFNGO00587 321 aa13.36□□□□□ -0.27
PCDHGB1-202ENST00000611598 KNG1P01042 644 aa13.36□□□□□ -0.27
PCDHGB1-202ENST00000611598 CDAP32320 146 aa13.36□□□□□ -0.27
PCDHGB1-202ENST00000611598 DHPSP49366 369 aaPredicted RBP13.36□□□□□ -0.27
PCDHGB1-202ENST00000611598 PPT1P50897 306 aa13.36□□□□□ -0.27
PCDHGB1-202ENST00000611598 HGFACQ04756 655 aa13.36□□□□□ -0.27
PCDHGB1-202ENST00000611598 SHISA6Q6ZSJ9 500 aa13.36□□□□□ -0.27
PCDHGB1-202ENST00000611598 OR8B12Q8NGG6 310 aa13.36□□□□□ -0.27
PCDHGB1-202ENST00000611598 OR5D18Q8NGL1 313 aa13.36□□□□□ -0.27
PCDHGB1-202ENST00000611598 SECTM1Q8WVN6 248 aa13.36□□□□□ -0.27
PCDHGB1-202ENST00000611598 NAA11Q9BSU3 229 aaPredicted RBP13.36□□□□□ -0.27
PCDHGB1-202ENST00000611598 OSGIN2Q9Y236 505 aa13.36□□□□□ -0.27
PCDHGB1-202ENST00000611598 LHFPL6Q9Y693 200 aa13.36□□□□□ -0.27
PCDHGB1-202ENST00000611598 HCKP08631 526 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 ZNF708P17019 499 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 ZNF17P17021 662 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 CPT2P23786 658 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 SULT1A2P50226 295 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 ZP4Q12836 540 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 FAM76BQ5HYJ3 339 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 Q6ZRG5 221 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 Q7L0L9 218 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 HIST1H2BAQ96A08 127 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 KIRREL1Q96J84 757 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 OCSTAMPQ9BR26 566 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 SMIM3Q9BZL3 60 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 GPR84Q9NQS5 396 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 SLC2A4RGQ9NR83 387 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 SMCO4Q9NRQ5 59 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 EHFQ9NZC4 300 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 COPS7AQ9UBW8 275 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 CACFD1Q9UGQ2 172 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 RTTNQ86VV8 2226 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 IGHV3-20A0A0C4DH32 117 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 A0A1W2PPE3 182 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 ZNF44P15621 663 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 OR3A2P47893 321 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 RAB5BP61020 215 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 CSNK2A1P68400 391 aaPredicted RBP13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 ECH1Q13011 328 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 MFAP5Q13361 173 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 ACTBL2Q562R1 376 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 TMEM268Q5VZI3 342 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 KIAA0895LQ68EN5 471 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 GALNTL5Q7Z4T8 443 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 CSNK2A3Q8NEV1 391 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 OR1N1Q8NGS0 311 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 KCNG3Q8TAE7 436 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 THAP3Q8WTV1 239 aaPredicted RBP13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 ZNF304Q9HCX3 659 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 CHST11Q9NPF2 352 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 GPR27Q9NS67 375 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 DNAJB11Q9UBS4 358 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 CFAP54Q96N23 3096 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 PRUNE2Q8WUY3 3088 aa13.35□□□□□ -0.27
PCDHGB1-202ENST00000611598 TLCD2A6NGC4 264 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 C10orf142B7Z368 130 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 H3BMH7 237 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 SGCEO43556 437 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 OPN1LWP04000 364 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 PTAFRP25105 342 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 PTGER4P35408 488 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 FASLGP48023 281 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 SNU13P55769 128 aaKnown RBP13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 C1orf189Q5VU69 101 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 CLEC9AQ6UXN8 241 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 C1QL2Q7Z5L3 287 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 ZNF441Q8N8Z8 693 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 DAZLQ92904 295 aaKnown RBP13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 GPER1Q99527 375 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 FBXL17Q9UF56 701 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 SUSD2Q9UGT4 822 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 POLR1DQ9Y2S0 133 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 IGKV1-9A0A0C4DH69 117 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 C5orf63A6NC05 138 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 PET100P0DJ07 73 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 FOLR2P14207 255 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 FBXW4P57775 412 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 ZNF121P58317 390 aaPredicted RBP13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 MFSD8Q8NHS3 518 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 NPRL2Q8WTW4 380 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 ISOC2Q96AB3 205 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 RPS10P5Q9NQ39 176 aa13.34□□□□□ -0.27
PCDHGB1-202ENST00000611598 C5orf52A6NGY3 159 aa13.33□□□□□ -0.27
PCDHGB1-202ENST00000611598 MRPS21P82921 87 aaKnown RBP13.33□□□□□ -0.27
PCDHGB1-202ENST00000611598 FOXF1Q12946 379 aa13.33□□□□□ -0.27
PCDHGB1-202ENST00000611598 KLHDC7BQ96G42 594 aa13.33□□□□□ -0.27
PCDHGB1-202ENST00000611598 VN1R1Q9GZP7 353 aa13.33□□□□□ -0.27
PCDHGB1-202ENST00000611598 EGLN1Q9GZT9 426 aa13.33□□□□□ -0.27
PCDHGB1-202ENST00000611598 SERINC1Q9NRX5 453 aa13.33□□□□□ -0.27
PCDHGB1-202ENST00000611598 B3GAT1Q9P2W7 334 aa13.33□□□□□ -0.27
PCDHGB1-202ENST00000611598 MED12Q93074 2177 aa13.33□□□□□ -0.28
PCDHGB1-202ENST00000611598 ASXL3Q9C0F0 2248 aa13.33□□□□□ -0.28
PCDHGB1-202ENST00000611598 IGKV1D-8A0A087WSZ0 117 aa13.33□□□□□ -0.28
PCDHGB1-202ENST00000611598 RER1O15258 196 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms