RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 PLXDC2Q6UX71 529 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 ZNF767PQ75MW2 155 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 FTMTQ8N4E7 242 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 OR52H1Q8NGJ2 320 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 OR2AE1Q8NHA4 323 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 AKR7LQ8NHP1 331 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 PP6455Q8WZ26 134 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 TTTY12Q9BZ98 90 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 CHST5Q9GZS9 411 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 PCDHGA1Q9Y5H4 931 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 LOC100509620A0A075B734 347 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 PCNX2A6NKB5 2137 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 DISC1C4P0D8 188 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 LINC01387J3KSC0 135 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 IGHV3-9P01782 118 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 CRYGSP22914 178 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 GNG2P59768 71 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 MEF2DQ14814 521 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 DRAM2Q6UX65 266 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 OR1F12Q8NHA8 337 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 CCDC107Q8WV48 283 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 SGK3Q96BR1 496 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 RAB3CQ96E17 227 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 WDR89Q96FK6 387 aaPredicted RBP11.92□□□□□ -0.5
NEK3-205ENST00000610828 NUDT16L1Q9BRJ7 211 aaKnown RBP11.92□□□□□ -0.5
NEK3-205ENST00000610828 KCNK7Q9Y2U2 307 aa11.92□□□□□ -0.5
NEK3-205ENST00000610828 ASPMQ8IZT6 3477 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 MED13Q9UHV7 2174 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 SIX6O95475 246 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 HPNP05981 417 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 OR4E1P0C645 316 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 UBBP0CG47 229 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 FCGR2AP12318 317 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 PRF1P14222 555 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 PTGFRP43088 359 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 HTR5AP47898 357 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 LHX2P50458 406 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 RAP2BP61225 183 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 CXADRP78310 365 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 HGFACQ04756 655 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 C2orf68Q2NKX9 166 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 PLAC9Q5JTB6 97 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 RIPPLY2Q5TAB7 128 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 SLC16A14Q7RTX9 510 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 C1QL2Q7Z5L3 287 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 OR2AK2Q8NG84 335 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 PIGTQ969N2 578 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 CST11Q9H112 138 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 GPR35Q9HC97 309 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 ZNF224Q9NZL3 707 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 NOSIPQ9Y314 301 aaKnown RBP11.91□□□□□ -0.5
NEK3-205ENST00000610828 MYO7BQ6PIF6 2116 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 GOSR2O14653 212 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 OR2A4O95047 310 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 LCATP04180 440 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 TPOP07202 933 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 HRH1P35367 487 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 PER3P56645 1201 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 H2BFSP57053 126 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 TRIP6Q15654 476 aaKnown RBP11.91□□□□□ -0.5
NEK3-205ENST00000610828 C11orf88Q6PI97 169 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 OR13C8Q8NGS7 320 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 REEP6Q96HR9 211 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 OR2A7Q96R45 310 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 PRRT1Q99946 306 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 URM1Q9BTM9 101 aaKnown RBP11.91□□□□□ -0.5
NEK3-205ENST00000610828 ALX4Q9H161 411 aaPredicted RBP11.91□□□□□ -0.5
NEK3-205ENST00000610828 SLC6A15Q9H2J7 730 aa11.91□□□□□ -0.5
NEK3-205ENST00000610828 OR14I1A6ND48 311 aa11.9□□□□□ -0.5
NEK3-205ENST00000610828 SSX5O60225 188 aa11.9□□□□□ -0.5
NEK3-205ENST00000610828 MRPL33O75394 65 aaKnown RBP11.9□□□□□ -0.5
NEK3-205ENST00000610828 HIST1H1DP16402 221 aaKnown RBP11.9□□□□□ -0.5
NEK3-205ENST00000610828 TMEM50BP56557 158 aa11.9□□□□□ -0.5
NEK3-205ENST00000610828 PRSS12P56730 875 aa11.9□□□□□ -0.5
NEK3-205ENST00000610828 PSG4Q00888 419 aa11.9□□□□□ -0.5
NEK3-205ENST00000610828 PLGLB1Q02325 96 aa11.9□□□□□ -0.5
NEK3-205ENST00000610828 ATPAF1Q5TC12 328 aaPredicted RBP11.9□□□□□ -0.5
NEK3-205ENST00000610828 ZBTB37Q5TC79 503 aa11.9□□□□□ -0.5
NEK3-205ENST00000610828 CRIP3Q6Q6R5 217 aa11.9□□□□□ -0.5
NEK3-205ENST00000610828 C17orf107Q6ZR85 190 aa11.9□□□□□ -0.5
NEK3-205ENST00000610828 GALNTL5Q7Z4T8 443 aa11.9□□□□□ -0.5
NEK3-205ENST00000610828 SEMA6DQ8NFY4 1073 aa11.9□□□□□ -0.5
NEK3-205ENST00000610828 OR56B1Q8NGI3 324 aa11.9□□□□□ -0.5
NEK3-205ENST00000610828 OR10K1Q8NGX5 313 aa11.9□□□□□ -0.5
NEK3-205ENST00000610828 S100A13Q99584 98 aa11.9□□□□□ -0.5
NEK3-205ENST00000610828 ELL3Q9HB65 397 aaPredicted RBP11.9□□□□□ -0.5
NEK3-205ENST00000610828 PLEKHA6Q9Y2H5 1048 aa11.9□□□□□ -0.5
NEK3-205ENST00000610828 TIMM10BQ9Y5J6 103 aa11.9□□□□□ -0.5
NEK3-205ENST00000610828 GSTP1P09211 210 aaKnown RBP11.9□□□□□ -0.51
NEK3-205ENST00000610828 NAT1P18440 290 aa11.9□□□□□ -0.51
NEK3-205ENST00000610828 SERPINA2P20848 420 aa11.9□□□□□ -0.51
NEK3-205ENST00000610828 ACKR3P25106 362 aa11.9□□□□□ -0.51
NEK3-205ENST00000610828 CLDN18P56856 261 aa11.9□□□□□ -0.51
NEK3-205ENST00000610828 FAM189A2Q15884 450 aa11.9□□□□□ -0.51
NEK3-205ENST00000610828 ATP1A1-AS1Q5TC04 95 aa11.9□□□□□ -0.51
NEK3-205ENST00000610828 TSPO2Q5TGU0 170 aa11.9□□□□□ -0.51
NEK3-205ENST00000610828 TEX261Q6UWH6 196 aa11.9□□□□□ -0.51
NEK3-205ENST00000610828 SKA3Q8IX90 412 aa11.9□□□□□ -0.51
NEK3-205ENST00000610828 TMEM251Q8N6I4 163 aa11.9□□□□□ -0.51
NEK3-205ENST00000610828 OR51T1Q8NGJ9 327 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms