RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 MRPS28Q9Y2Q9 187 aaKnown RBP12.98□□□□□ -0.33
CTCFL-219ENST00000608720 IGHV3-20A0A0C4DH32 117 aa12.98□□□□□ -0.33
CTCFL-219ENST00000608720 ETV2O00321 342 aaPredicted RBP12.98□□□□□ -0.33
CTCFL-219ENST00000608720 GIMD1P0DJR0 217 aa12.98□□□□□ -0.33
CTCFL-219ENST00000608720 PJVKQ0ZLH3 352 aa12.98□□□□□ -0.33
CTCFL-219ENST00000608720 KIF26BQ2KJY2 2108 aa12.98□□□□□ -0.33
CTCFL-219ENST00000608720 NAA40Q86UY6 237 aa12.98□□□□□ -0.33
CTCFL-219ENST00000608720 RAB3CQ96E17 227 aa12.98□□□□□ -0.33
CTCFL-219ENST00000608720 SCGB3A2Q96PL1 93 aa12.98□□□□□ -0.33
CTCFL-219ENST00000608720 RCC2Q9P258 522 aaKnown RBP12.98□□□□□ -0.33
CTCFL-219ENST00000608720 GPR132Q9UNW8 380 aa12.98□□□□□ -0.33
CTCFL-219ENST00000608720 THADAQ6YHU6 1953 aa12.98□□□□□ -0.33
CTCFL-219ENST00000608720 A0A0B4J2A0 478 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 ZNF878C9JN71 531 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 NDUFS6O75380 124 aaKnown RBP12.97□□□□□ -0.33
CTCFL-219ENST00000608720 FOSL2P15408 326 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 RCC1P18754 421 aaPredicted RBP12.97□□□□□ -0.33
CTCFL-219ENST00000608720 CSNK1EP49674 416 aaKnown RBP12.97□□□□□ -0.33
CTCFL-219ENST00000608720 PTCRAQ6ISU1 281 aaPredicted RBP12.97□□□□□ -0.33
CTCFL-219ENST00000608720 FIP1L1Q6UN15 594 aaKnown RBP12.97□□□□□ -0.33
CTCFL-219ENST00000608720 SHISA6Q6ZSJ9 500 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 BAP18Q8IXM2 172 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 KDF1Q8NAX2 398 aaPredicted RBP12.97□□□□□ -0.33
CTCFL-219ENST00000608720 OR4A4PQ8NGN8 299 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 NICN1Q9BSH3 213 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 RNF126Q9BV68 326 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 TGIF2Q9GZN2 237 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 CHRDQ9H2X0 955 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 ZNF576Q9H609 170 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 SHPKQ9UHJ6 478 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 SRPK3Q9UPE1 567 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 FREM3P0C091 2139 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 CEACAM18A8MTB9 384 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 H3BML4 177 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 MPIG6BO95866 241 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 IGHV2-5P01817 119 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 HIST1H1DP16402 221 aaKnown RBP12.97□□□□□ -0.33
CTCFL-219ENST00000608720 NXPH1P58417 271 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 CLRN1P58418 232 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 KMT5CQ86Y97 462 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 APCDD1LQ8NCL9 501 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 NUBPLQ8TB37 319 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 MRGPRX4Q96LA9 322 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 NRIP2Q9BQI9 281 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 RAB18Q9NP72 206 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 SDHAF3Q9NRP4 125 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 FGF21Q9NSA1 209 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 B3GAT1Q9P2W7 334 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 POLR1DQ9Y2S0 133 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 LHFPL6Q9Y693 200 aa12.97□□□□□ -0.33
CTCFL-219ENST00000608720 A0A0A6YYD4 124 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 CDC14BO60729 498 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 ZNF354AO60765 605 aaPredicted RBP12.96□□□□□ -0.33
CTCFL-219ENST00000608720 SFT2D2O95562 160 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 IGHG1P01857 330 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 ZNF44P15621 663 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 BTF3P20290 206 aaKnown RBP12.96□□□□□ -0.33
CTCFL-219ENST00000608720 MSX1P28360 303 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 AKR1C2P52895 323 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 AKR1C1Q04828 323 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 AIMP2Q13155 320 aaKnown RBP12.96□□□□□ -0.33
CTCFL-219ENST00000608720 SLC25A53Q5H9E4 307 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 UEVLDQ8IX04 471 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 OR5AS1Q8N127 324 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 NFAM1Q8NET5 270 aaPredicted RBP12.96□□□□□ -0.33
CTCFL-219ENST00000608720 OR2I1PQ8NGU4 316 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 STT3BQ8TCJ2 826 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 TCTEX1D2Q8WW35 142 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 ZNF501Q96CX3 271 aaPredicted RBP12.96□□□□□ -0.33
CTCFL-219ENST00000608720 OCSTAMPQ9BR26 566 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 NUDT22Q9BRQ3 303 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 DUSP15Q9H1R2 295 aaPredicted RBP12.96□□□□□ -0.33
CTCFL-219ENST00000608720 SEC61A2Q9H9S3 476 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 GHRLQ9UBU3 117 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 WDFY4Q6ZS81 3184 aa12.96□□□□□ -0.33
CTCFL-219ENST00000608720 COL5A1P20908 1838 aaPredicted RBP12.96□□□□□ -0.33
CTCFL-219ENST00000608720 MT-ND4LP03901 98 aa12.96□□□□□ -0.34
CTCFL-219ENST00000608720 ZNF41P51814 821 aaPredicted RBP12.96□□□□□ -0.34
CTCFL-219ENST00000608720 SGCAQ16586 387 aa12.96□□□□□ -0.34
CTCFL-219ENST00000608720 PLAC9Q5JTB6 97 aa12.96□□□□□ -0.34
CTCFL-219ENST00000608720 ANKRD37Q7Z713 158 aa12.96□□□□□ -0.34
CTCFL-219ENST00000608720 TMEM200AQ86VY9 491 aa12.96□□□□□ -0.34
CTCFL-219ENST00000608720 COMMD2Q86X83 199 aa12.96□□□□□ -0.34
CTCFL-219ENST00000608720 BOLLQ8N9W6 283 aaKnown RBP12.96□□□□□ -0.34
CTCFL-219ENST00000608720 ADPRHL1Q8NDY3 354 aa12.96□□□□□ -0.34
CTCFL-219ENST00000608720 TMEM104Q8NE00 496 aa12.96□□□□□ -0.34
CTCFL-219ENST00000608720 CADM4Q8NFZ8 388 aa12.96□□□□□ -0.34
CTCFL-219ENST00000608720 OR56B1Q8NGI3 324 aa12.96□□□□□ -0.34
CTCFL-219ENST00000608720 THAP3Q8WTV1 239 aaPredicted RBP12.96□□□□□ -0.34
CTCFL-219ENST00000608720 C1orf147Q96MC9 270 aaPredicted RBP12.96□□□□□ -0.34
CTCFL-219ENST00000608720 TMEM59Q9BXS4 323 aa12.96□□□□□ -0.34
CTCFL-219ENST00000608720 C5orf66Q9H5L9 145 aa12.96□□□□□ -0.34
CTCFL-219ENST00000608720 TUBA4BQ9H853 241 aa12.96□□□□□ -0.34
CTCFL-219ENST00000608720 TREM1Q9NP99 234 aa12.96□□□□□ -0.34
CTCFL-219ENST00000608720 ASH2LQ9UBL3 628 aa12.96□□□□□ -0.34
CTCFL-219ENST00000608720 SOCS1O15524 211 aa12.95□□□□□ -0.34
CTCFL-219ENST00000608720 KCNAB3O43448 404 aa12.95□□□□□ -0.34
CTCFL-219ENST00000608720 EFNA2O43921 213 aa12.95□□□□□ -0.34
CTCFL-219ENST00000608720 PIAS2O75928 621 aa12.95□□□□□ -0.34
CTCFL-219ENST00000608720 BCKDHBP21953 392 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms