RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 LAMP3Q9UQV4 416 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 HS3ST3A1Q9Y663 406 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 MCM3APO60318 1980 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 TRIP11Q15643 1979 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 CDH23Q9H251 3354 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 C9JQL5 133 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 CLDN7O95471 211 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 AMBPP02760 352 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 CD74P04233 296 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 SEMG1P04279 462 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 C1QTNF9P0C862 333 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 TRGC1P0CF51 173 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 HOXB2P14652 356 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 MALP21145 153 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 TIMP3P35625 211 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 SLC6A9P48067 706 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 HTR6P50406 440 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 DVL1P1P54792 670 aaPredicted RBP4.2□□□□□ -1.74
LINC01109-201ENST00000603837 RPS23P62266 143 aaKnown RBP4.2□□□□□ -1.74
LINC01109-201ENST00000603837 RPL32P62910 135 aaKnown RBP4.2□□□□□ -1.74
LINC01109-201ENST00000603837 DLK1P80370 383 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 BCL2L1Q07817 233 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 ATXN7L3Q14CW9 347 aaPredicted RBP4.2□□□□□ -1.74
LINC01109-201ENST00000603837 RPE65Q16518 533 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 TAF9Q16594 264 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 MSMPQ1L6U9 139 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 CXorf66Q5JRM2 361 aaPredicted RBP4.2□□□□□ -1.74
LINC01109-201ENST00000603837 SIRPB2Q5JXA9 342 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 OR2G6Q5TZ20 316 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 FCRL6Q6DN72 434 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 TCTN3Q6NUS6 607 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 DOK6Q6PKX4 331 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 APOOLQ6UXV4 268 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 LINGO4Q6UY18 593 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 ZNF621Q6ZSS3 439 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 LINC01551Q86U37 167 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 CILP2Q8IUL8 1156 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 MSRB3Q8IXL7 192 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 BEST3Q8N1M1 668 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 TMEM217Q8N7C4 229 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 CCDC71LQ8N9Z2 235 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 SIDT2Q8NBJ9 832 aaKnown RBP4.2□□□□□ -1.74
LINC01109-201ENST00000603837 TMEM161BQ8NDZ6 487 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 OR52L2PQ8NGH6 319 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 TMED6Q8WW62 240 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 PIGCQ92535 297 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 RPUSD4Q96CM3 377 aaKnown RBP4.2□□□□□ -1.74
LINC01109-201ENST00000603837 YPEL4Q96NS1 127 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 OR8D2Q9GZM6 311 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 COMMD9Q9P000 198 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 CLEC1BQ9P126 229 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 B3GAT1Q9P2W7 334 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 HCFC2Q9Y5Z7 792 aa4.2□□□□□ -1.74
LINC01109-201ENST00000603837 ZAR1LA6NP61 321 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 DCTN6O00399 190 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 GSTZ1O43708 216 aaPredicted RBP4.19□□□□□ -1.74
LINC01109-201ENST00000603837 OR1F1O43749 312 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 MFSD11O43934 449 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 B4GALT3O60512 393 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 REM1O75628 298 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 TRGC2P03986 189 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 UMODP07911 640 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 CHRM4P08173 479 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 FCGR2AP12318 317 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 S100GP29377 79 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 RIPPLY3P57055 190 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 CRMP1Q14194 572 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 VWC2Q2TAL6 325 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 LINC00303Q3SY05 128 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 GRHL2Q6ISB3 625 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 CTU1Q7Z7A3 348 aaKnown RBP4.19□□□□□ -1.74
LINC01109-201ENST00000603837 FBXO16Q8IX29 292 aaPredicted RBP4.19□□□□□ -1.74
LINC01109-201ENST00000603837 IZUMO1Q8IYV9 350 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 OR4E2Q8NGC2 313 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 OR9A4Q8NGU2 314 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 SORCS1Q8WY21 1168 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 MSI2Q96DH6 328 aaKnown RBP4.19□□□□□ -1.74
LINC01109-201ENST00000603837 SLC35E1Q96K37 410 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 COPS8Q99627 209 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 ZNF670Q9BS34 389 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 MARCH5Q9NX47 278 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 WRAP73Q9P2S5 460 aaPredicted RBP4.19□□□□□ -1.74
LINC01109-201ENST00000603837 RAI2Q9Y5P3 530 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 ENPP4Q9Y6X5 453 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 MYO9BQ13459 2157 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 MGAMO43451 1857 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 PIKFYVEQ9Y2I7 2098 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 A0A1W2PQM1 296 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 RNF222A6NCQ9 220 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 AQP7P3A6NL99 342 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 A8MVM7 634 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 K7ERU9 68 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 BHLHE40O14503 412 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 HYAL3O43820 417 aaPredicted RBP4.19□□□□□ -1.74
LINC01109-201ENST00000603837 DCNP07585 359 aaKnown RBP4.19□□□□□ -1.74
LINC01109-201ENST00000603837 HOXC6P09630 235 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 VSIG10L2P0DP72 767 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 OMGP23515 440 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 SOX2P48431 317 aa4.19□□□□□ -1.74
LINC01109-201ENST00000603837 ERVFRD-1P60508 538 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms