RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 CSNK2A3Q8NEV1 391 aa15.53■□□□□ 0.08
VRK3-225ENST00000601912 OR5H6Q8NGV6 325 aa15.53■□□□□ 0.08
VRK3-225ENST00000601912 A0A1B0GUH1 482 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 J3QRK9 145 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 GMDSO60547 372 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 NRASP01111 189 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 APOA1P02647 267 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 FAM157BP0CG42 384 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 ELK1P19419 428 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 TUBG1P23258 451 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 ZNF83P51522 516 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 PRSS12P56730 875 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 PPP1CBP62140 327 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 P2RY14Q15391 338 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 CNN3Q15417 329 aaKnown RBP15.52■□□□□ 0.08
VRK3-225ENST00000601912 UBE2V2Q15819 145 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 UBE2NLQ5JXB2 153 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 C1orf100Q5SVJ3 147 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 FAM166AQ6J272 317 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 CNIH2Q6PI25 160 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 FAM131AQ6UXB0 335 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 SPSB1Q96BD6 273 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 FAM3DQ96BQ1 224 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 TECTBQ96PL2 329 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 TUBG2Q9NRH3 451 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 OR5V1Q9UGF6 321 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 KCNN3Q9UGI6 736 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 COL6A6A6NMZ7 2263 aa15.52■□□□□ 0.08
VRK3-225ENST00000601912 PCNX1Q96RV3 2341 aa15.52■□□□□ 0.07
VRK3-225ENST00000601912 IGKV1-9A0A0C4DH69 117 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 M0R1B8 84 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 PRF1P14222 555 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 PRKACBP22694 351 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 ASCL1P50553 236 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 TMEM42Q69YG0 159 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 C16orf87Q6PH81 154 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 METAP1DQ6UB28 335 aaPredicted RBP15.51■□□□□ 0.07
VRK3-225ENST00000601912 LYPD6Q86Y78 171 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 C1orf174Q8IYL3 243 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 OR56B2PQ8NGI1 322 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 OR1J1Q8NGS3 322 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 CPNE2Q96FN4 548 aaPredicted RBP15.51■□□□□ 0.07
VRK3-225ENST00000601912 GPER1Q99527 375 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 BCL2L14Q9BZR8 327 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 POFUT1Q9H488 388 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 CNTD2Q9H8S5 307 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 GPR173Q9NS66 373 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 CYSLTR2Q9NS75 346 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 LOC100289279A0A1B0GTE1 492 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 EIF4EP06730 217 aaKnown RBP15.51■□□□□ 0.07
VRK3-225ENST00000601912 ARSBP15848 533 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 AZGP1P25311 298 aaKnown RBP15.51■□□□□ 0.07
VRK3-225ENST00000601912 RIN1Q13671 783 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 FBXW12Q6X9E4 464 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 PNLDC1Q8NA58 520 aaKnown RBP15.51■□□□□ 0.07
VRK3-225ENST00000601912 OR51D1Q8NGF3 324 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 PIGCQ92535 297 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 PIGTQ969N2 578 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 PALMDQ9NP74 551 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 EXTL2Q9UBQ6 330 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 V9GYH0 126 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 NBEAQ8NFP9 2946 aa15.51■□□□□ 0.07
VRK3-225ENST00000601912 CACNA1BQ00975 2339 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 IGHV2OR16-5A0A0B4J2B6 119 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 CD300LBA8K4G0 201 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 CRYAAP02489 173 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 PPP3CBP16298 524 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 CCKARP32238 428 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 POU3F4P49335 361 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 ART1P52961 327 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 NAAAQ02083 359 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 C2orf76Q3KRA6 126 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 SPATA46Q5T0L3 261 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 MTFR2Q6P444 385 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 GALNT11Q8NCW6 608 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 NPRL2Q8WTW4 380 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 SLC25A28Q96A46 364 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 LRRC46Q96FV0 321 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 CCDC120Q96HB5 630 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 ERRFI1Q9UJM3 462 aaPredicted RBP15.5■□□□□ 0.07
VRK3-225ENST00000601912 SLC7A11Q9UPY5 501 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 RHBDD3Q9Y3P4 386 aa15.5■□□□□ 0.07
VRK3-225ENST00000601912 PTBP1P26599 531 aaKnown RBP eCLIP15.49■□□□□ 0.07
VRK3-225ENST00000601912 KISS1Q15726 138 aa15.49■□□□□ 0.07
VRK3-225ENST00000601912 XKRXQ6PP77 449 aa15.49■□□□□ 0.07
VRK3-225ENST00000601912 MOB3CQ70IA8 216 aa15.49■□□□□ 0.07
VRK3-225ENST00000601912 OR4D6Q8NGJ1 314 aa15.49■□□□□ 0.07
VRK3-225ENST00000601912 SLC25A40Q8TBP6 338 aa15.49■□□□□ 0.07
VRK3-225ENST00000601912 RAB40AQ8WXH6 277 aa15.49■□□□□ 0.07
VRK3-225ENST00000601912 CMBLQ96DG6 245 aa15.49■□□□□ 0.07
VRK3-225ENST00000601912 SPACA5Q96QH8 159 aa15.49■□□□□ 0.07
VRK3-225ENST00000601912 NKX3-1Q99801 234 aaPredicted RBP15.49■□□□□ 0.07
VRK3-225ENST00000601912 PAPOLGQ9BWT3 736 aaKnown RBP15.49■□□□□ 0.07
VRK3-225ENST00000601912 OR2J1Q9GZK6 312 aa15.49■□□□□ 0.07
VRK3-225ENST00000601912 SPEF1Q9Y4P9 236 aa15.49■□□□□ 0.07
VRK3-225ENST00000601912 ANKRD30BLA7E2S9 258 aa15.48■□□□□ 0.07
VRK3-225ENST00000601912 CST4P01036 141 aa15.48■□□□□ 0.07
VRK3-225ENST00000601912 RAC2P15153 192 aa15.48■□□□□ 0.07
VRK3-225ENST00000601912 SELEP16581 610 aa15.48■□□□□ 0.07
VRK3-225ENST00000601912 ADORA2A-AS1P86434 159 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms