RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 LPAR3Q9UBY5 353 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 AASSQ9UDR5 926 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 OR52A1Q9UKL2 312 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 PCDHB10Q9UN67 800 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 GTF2A1LQ9UNN4 478 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 SNX5Q9Y5X3 404 aa14.17□□□□□ -0.14
TRIM28-215ENST00000601150 ANXA2P2A6NMY6 339 aa14.16□□□□□ -0.14
TRIM28-215ENST00000601150 FSTL3O95633 263 aa14.16□□□□□ -0.14
TRIM28-215ENST00000601150 CST4P01036 141 aa14.16□□□□□ -0.14
TRIM28-215ENST00000601150 IGLV3-1P01715 115 aa14.16□□□□□ -0.14
TRIM28-215ENST00000601150 TTRP02766 147 aa14.16□□□□□ -0.14
TRIM28-215ENST00000601150 IL5RAQ01344 420 aa14.16□□□□□ -0.14
TRIM28-215ENST00000601150 ZNF85Q03923 595 aa14.16□□□□□ -0.14
TRIM28-215ENST00000601150 PRDX4Q13162 271 aa14.16□□□□□ -0.14
TRIM28-215ENST00000601150 CHRFAM7AQ494W8 412 aa14.16□□□□□ -0.14
TRIM28-215ENST00000601150 ZNF684Q5T5D7 378 aa14.16□□□□□ -0.14
TRIM28-215ENST00000601150 PPP1R14AQ96A00 147 aa14.16□□□□□ -0.14
TRIM28-215ENST00000601150 MICU1Q9BPX6 476 aa14.16□□□□□ -0.14
TRIM28-215ENST00000601150 BEX2Q9BXY8 128 aa14.16□□□□□ -0.14
TRIM28-215ENST00000601150 G6PC2Q9NQR9 355 aa14.16□□□□□ -0.14
TRIM28-215ENST00000601150 GPR84Q9NQS5 396 aa14.16□□□□□ -0.14
TRIM28-215ENST00000601150 RNF7Q9UBF6 113 aa14.16□□□□□ -0.14
TRIM28-215ENST00000601150 PCDHGB1Q9Y5G3 927 aa14.16□□□□□ -0.14
TRIM28-215ENST00000601150 PPIAL4EA0A075B759 164 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 TRAV20A0A0B4J274 112 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 ZNF816-ZNF321PA0A0X1KG74 233 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 DAPL1A0PJW8 107 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 ERICH4A6NGS2 130 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 A6NLC8 198 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 PPIAL4DF5H284 164 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 J3QRE1 110 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 CASQ2O14958 399 aaPredicted RBP14.15□□□□□ -0.14
TRIM28-215ENST00000601150 RPP14O95059 124 aaKnown RBP14.15□□□□□ -0.14
TRIM28-215ENST00000601150 PPIAL4FP0DN26 164 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 DBTP11182 482 aaKnown RBP14.15□□□□□ -0.14
TRIM28-215ENST00000601150 HNF1AP20823 631 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 PCMT1P22061 227 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 ZNF91Q05481 1191 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 CR1LQ2VPA4 569 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 FAM120AOSQ5T036 256 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 LIPNQ5VXI9 398 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 FAM220AQ7Z4H9 259 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 ELMOD2Q8IZ81 293 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 ACBD7Q8N6N7 88 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 PIGCQ92535 297 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 TMEM186Q96B77 213 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 FAM71F1Q96KD3 344 aaPredicted RBP14.15□□□□□ -0.14
TRIM28-215ENST00000601150 RTL8AQ9BWD3 113 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 SHARPINQ9H0F6 387 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 PPP1R3EQ9H7J1 279 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 DCLRE1BQ9H816 532 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 PATZ1Q9HBE1 687 aaKnown RBP14.15□□□□□ -0.14
TRIM28-215ENST00000601150 HIF1ANQ9NWT6 349 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 C1orf123Q9NWV4 160 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 EXOGQ9Y2C4 368 aaKnown RBP14.15□□□□□ -0.14
TRIM28-215ENST00000601150 PPIAL4AQ9Y536 164 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 NAV3Q8IVL0 2385 aa14.15□□□□□ -0.14
TRIM28-215ENST00000601150 ZNF850A8MQ14 1090 aa14.14□□□□□ -0.15
TRIM28-215ENST00000601150 PLPP2O43688 288 aa14.14□□□□□ -0.15
TRIM28-215ENST00000601150 MTRF1O75570 445 aaKnown RBP14.14□□□□□ -0.15
TRIM28-215ENST00000601150 DHRS3O75911 302 aa14.14□□□□□ -0.15
TRIM28-215ENST00000601150 ZNF205O95201 554 aa14.14□□□□□ -0.15
TRIM28-215ENST00000601150 ELF3P78545 371 aaPredicted RBP14.14□□□□□ -0.15
TRIM28-215ENST00000601150 RIPPLY1Q0D2K3 151 aa14.14□□□□□ -0.15
TRIM28-215ENST00000601150 FAM201AQ5SY85 155 aa14.14□□□□□ -0.15
TRIM28-215ENST00000601150 ZBTB37Q5TC79 503 aa14.14□□□□□ -0.15
TRIM28-215ENST00000601150 OGFRL1Q5TC84 451 aaPredicted RBP14.14□□□□□ -0.15
TRIM28-215ENST00000601150 TTC23Q5W5X9 447 aa14.14□□□□□ -0.15
TRIM28-215ENST00000601150 KRT74Q7RTS7 529 aa14.14□□□□□ -0.15
TRIM28-215ENST00000601150 THAP5Q7Z6K1 395 aa14.14□□□□□ -0.15
TRIM28-215ENST00000601150 WDR86Q86TI4 376 aa14.14□□□□□ -0.15
TRIM28-215ENST00000601150 SEMA6DQ8NFY4 1073 aa14.14□□□□□ -0.15
TRIM28-215ENST00000601150 CYGBQ8WWM9 190 aa14.14□□□□□ -0.15
TRIM28-215ENST00000601150 OR5P3Q8WZ94 311 aa14.14□□□□□ -0.15
TRIM28-215ENST00000601150 LGALS12Q96DT0 336 aa14.14□□□□□ -0.15
TRIM28-215ENST00000601150 ITPKCQ96DU7 683 aa14.14□□□□□ -0.15
TRIM28-215ENST00000601150 TMEM165Q9HC07 324 aa14.14□□□□□ -0.15
TRIM28-215ENST00000601150 GNG8Q9UK08 70 aa14.14□□□□□ -0.15
TRIM28-215ENST00000601150 hCG_1807616A0A1W2PRN6 198 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 CEACAM18A8MTB9 384 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 FOXH1O75593 365 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 CPT2P23786 658 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 ISL1P61371 349 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 ZNF404Q494X3 552 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 TP53I3Q53FA7 332 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 ZNF691Q5VV52 312 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 ZNF826PQ6ZT77 177 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 KCTD20Q7Z5Y7 419 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 CATSPERDQ86XM0 798 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 ZDHHC23Q8IYP9 409 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 DHRSXQ8N5I4 330 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 OR1M1Q8NGA1 313 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 APH1BQ8WW43 257 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 RORBQ92753 470 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 MRPL48Q96GC5 212 aaKnown RBP14.13□□□□□ -0.15
TRIM28-215ENST00000601150 HIST1H2AAQ96QV6 131 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 TMEM246Q9BRR3 403 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 ACOXLQ9NUZ1 547 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 SLC22A13Q9Y226 551 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 RPL36Q9Y3U8 105 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms