RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 TIPRLO75663 272 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 RHCEP18577 417 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 PAX6P26367 422 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 NOS3P29474 1203 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 PYCR1P32322 319 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 EMX1Q04741 257 aaPredicted RBP13.64□□□□□ -0.23
USE1-208ENST00000600970 LRRC75BQ2VPJ9 315 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 FOXB2Q5VYV0 432 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 PGBD2Q6P3X8 592 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 OR9Q1Q8NGQ5 310 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 OR52J3Q8NH60 311 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 RCN3Q96D15 328 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 DHRS1Q96LJ7 313 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 COPS4Q9BT78 406 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 IFT27Q9BW83 186 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 PPP1R3EQ9H7J1 279 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 RAB18Q9NP72 206 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 SNTG1Q9NSN8 517 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 HAO2Q9NYQ3 351 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 SF3B6Q9Y3B4 125 aaKnown RBP13.64□□□□□ -0.23
USE1-208ENST00000600970 CAPN7Q9Y6W3 813 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 TVP23AA6NH52 213 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 CDIPTO14735 213 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 DIRAS1O95057 198 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 TFF1P04155 84 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 VSIG8P0DPA2 414 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 CD28P10747 220 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 GMFBP60983 142 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 FAM3AP98173 230 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 DGUOKQ16854 277 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 LYPD4Q6UWN0 246 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 ZNF788Q6ZQV5 615 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 SLC16A9Q7RTY1 509 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 DCXRQ7Z4W1 244 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 ARPINQ7Z6K5 226 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 ZDHHC21Q8IVQ6 265 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 OR4C15Q8NGM1 316 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 ZNRF4Q8WWF5 429 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 FAM162AQ96A26 154 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 R3HDM4Q96D70 268 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 C7orf34Q96L11 122 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 GAFA1Q96PS6 74 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 KCNJ15Q99712 375 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 DNTTIP1Q9H147 329 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 TLNRD1Q9H1K6 362 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 WDR13Q9H1Z4 485 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 SLC25A10Q9UBX3 287 aaPredicted RBP13.63□□□□□ -0.23
USE1-208ENST00000600970 ZNF391Q9UJN7 358 aa13.63□□□□□ -0.23
USE1-208ENST00000600970 A0A1W2PQ09 198 aa13.62□□□□□ -0.23
USE1-208ENST00000600970 NKX6-3A6NJ46 265 aa13.62□□□□□ -0.23
USE1-208ENST00000600970 NME4O00746 187 aa13.62□□□□□ -0.23
USE1-208ENST00000600970 IDH3BO43837 385 aa13.62□□□□□ -0.23
USE1-208ENST00000600970 CHST1O43916 411 aa13.62□□□□□ -0.23
USE1-208ENST00000600970 NCK1P16333 377 aa13.62□□□□□ -0.23
USE1-208ENST00000600970 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.62□□□□□ -0.23
USE1-208ENST00000600970 BLMHQ13867 455 aa13.62□□□□□ -0.23
USE1-208ENST00000600970 SLC35F1Q5T1Q4 408 aa13.62□□□□□ -0.23
USE1-208ENST00000600970 C11orf87Q6NUJ2 197 aa13.62□□□□□ -0.23
USE1-208ENST00000600970 NDUFA11Q86Y39 141 aa13.62□□□□□ -0.23
USE1-208ENST00000600970 DUS3LQ96G46 650 aaKnown RBP13.62□□□□□ -0.23
USE1-208ENST00000600970 MED30Q96HR3 178 aa13.62□□□□□ -0.23
USE1-208ENST00000600970 RAB3IPQ96QF0 476 aaPredicted RBP13.62□□□□□ -0.23
USE1-208ENST00000600970 NPFFR1Q9GZQ6 430 aa13.62□□□□□ -0.23
USE1-208ENST00000600970 CENPMQ9NSP4 180 aa13.62□□□□□ -0.23
USE1-208ENST00000600970 SERTAD4Q9NUC0 356 aa13.62□□□□□ -0.23
USE1-208ENST00000600970 ADARB2-AS1A8MUL3 147 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 TBX1O43435 398 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 ANGPTL7O43827 346 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 MPIG6BO95866 241 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 NDUFB7P17568 137 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 GSK3BP49841 420 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 SLC7A2P52569 658 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 CAV3P56539 151 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 MXRA7P84157 204 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 SF3A3Q12874 501 aaKnown RBP eCLIP13.61□□□□□ -0.23
USE1-208ENST00000600970 HABP2Q14520 560 aaPredicted RBP13.61□□□□□ -0.23
USE1-208ENST00000600970 TAF13Q15543 124 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 AANATQ16613 207 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 ZBTB37Q5TC79 503 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 DTX3Q8N9I9 347 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 CYB561A3Q8NBI2 242 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 PROKR2Q8NFJ6 384 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 OR4F17Q8NGA8 305 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 ANGPTL6Q8NI99 470 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 PIFOQ8TCI5 191 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 SGK3Q96BR1 496 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 SLAMF6Q96DU3 332 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 OR4F4Q96R69 305 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 DDOQ99489 341 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 NKX3-1Q99801 234 aaPredicted RBP13.61□□□□□ -0.23
USE1-208ENST00000600970 ZNF702PQ9H963 129 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 COMMD3-BMI1R4GMX3 469 aa13.61□□□□□ -0.23
USE1-208ENST00000600970 hCG_38984A0A1B0GV85 526 aa13.6□□□□□ -0.23
USE1-208ENST00000600970 H0YAE9 185 aa13.6□□□□□ -0.23
USE1-208ENST00000600970 SIGLEC5O15389 551 aa13.6□□□□□ -0.23
USE1-208ENST00000600970 POU1F1P28069 291 aa13.6□□□□□ -0.23
USE1-208ENST00000600970 BMXP51813 675 aa13.6□□□□□ -0.23
USE1-208ENST00000600970 KRT72Q14CN4 511 aa13.6□□□□□ -0.23
USE1-208ENST00000600970 TIGD6Q17RP2 521 aa13.6□□□□□ -0.23
USE1-208ENST00000600970 KLHL12Q53G59 568 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms