RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 CFL1P23528 166 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-217ENST00000598558 LMO4P61968 165 aa11.97□□□□□ -0.49
SHKBP1-217ENST00000598558 DOC2BQ14184 412 aa11.97□□□□□ -0.49
SHKBP1-217ENST00000598558 HFEQ30201 348 aa11.97□□□□□ -0.49
SHKBP1-217ENST00000598558 KLHL22Q53GT1 634 aa11.97□□□□□ -0.49
SHKBP1-217ENST00000598558 BCL2L15Q5TBC7 163 aa11.97□□□□□ -0.49
SHKBP1-217ENST00000598558 CLEC9AQ6UXN8 241 aa11.97□□□□□ -0.49
SHKBP1-217ENST00000598558 ZNF826PQ6ZT77 177 aa11.97□□□□□ -0.49
SHKBP1-217ENST00000598558 THAP5Q7Z6K1 395 aa11.97□□□□□ -0.49
SHKBP1-217ENST00000598558 BIVMQ86UB2 503 aa11.97□□□□□ -0.49
SHKBP1-217ENST00000598558 ZNF540Q8NDQ6 660 aa11.97□□□□□ -0.49
SHKBP1-217ENST00000598558 OR14K1Q8NGZ2 314 aa11.97□□□□□ -0.49
SHKBP1-217ENST00000598558 OR2G2Q8NGZ5 317 aa11.97□□□□□ -0.49
SHKBP1-217ENST00000598558 CLDND2Q8NHS1 167 aa11.97□□□□□ -0.49
SHKBP1-217ENST00000598558 VCXQ9H320 206 aa11.97□□□□□ -0.49
SHKBP1-217ENST00000598558 UFSP2Q9NUQ7 469 aa11.97□□□□□ -0.49
SHKBP1-217ENST00000598558 PPP1R3CQ9UQK1 317 aa11.97□□□□□ -0.49
SHKBP1-217ENST00000598558 PCDHGB1Q9Y5G3 927 aa11.97□□□□□ -0.49
SHKBP1-217ENST00000598558 ZANQ9Y493 2812 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 ANKRD30BLA7E2S9 258 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 TMEM178BH3BS89 294 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 CST4P01036 141 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 FAHP16930 419 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 TNFRSF1AP19438 455 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 THBS2P35442 1172 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 GATA4P43694 442 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 SRP9P49458 86 aaKnown RBP11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 PRDX4Q13162 271 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 FDX2Q6P4F2 183 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 IZUMO2Q6UXV1 221 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 KCTD20Q7Z5Y7 419 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 CSNK2A3Q8NEV1 391 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 BPIFB6Q8NFQ5 453 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 OR10AC1Q8NH08 325 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 HPSE2Q8WWQ2 592 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 PIGCQ92535 297 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 SGCDQ92629 289 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 ITPKCQ96DU7 683 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 JAM3Q9BX67 310 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 SLC22A4Q9H015 551 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 PLCXD1Q9NUJ7 323 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 PSORS1C1Q9UIG5 152 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 ZNF391Q9UJN7 358 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 V9GYS6 101 aa11.96□□□□□ -0.49
SHKBP1-217ENST00000598558 CLDN25C9JDP6 229 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 IGHV2-70P01814 119 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 GRPP07492 148 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 CCL1P22362 96 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 MAP2K3P46734 347 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 GTF2A1P52655 376 aaPredicted RBP11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 CSNK2BP67870 215 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 ZMYND11Q15326 602 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 C6orf141Q5SZD1 244 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 OR2G6Q5TZ20 316 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 XAF1Q6GPH4 301 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 COMMD2Q86X83 199 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 CELF2-AS1Q8N7Q2 184 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 C19orf18Q8NEA5 215 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 SEMA6DQ8NFY4 1073 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 OR5P3Q8WZ94 311 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 MSI2Q96DH6 328 aaKnown RBP11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 PAPOLGQ9BWT3 736 aaKnown RBP11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 METTL17Q9H7H0 456 aaPredicted RBP11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 MOB1AQ9H8S9 216 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 FKBP14Q9NWM8 211 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 PIGLQ9Y2B2 252 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 NPTNQ9Y639 398 aa11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 SIRT4Q9Y6E7 314 aaPredicted RBP11.95□□□□□ -0.5
SHKBP1-217ENST00000598558 CHD3Q12873 2000 aaKnown RBP11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 MED13LQ71F56 2210 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 ZNF816-ZNF321PA0A0X1KG74 233 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 OR4C45A6NMZ5 311 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 FAM157AC9JC47 383 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 DHRS3O75911 302 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 LALBAP00709 142 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 ATP6V1B1P15313 513 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 MYF6P23409 242 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 DCKP27707 260 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 C21orf33P30042 268 aaPredicted RBP11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 RIPPLY1Q0D2K3 151 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 ST3GAL4Q11206 333 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 CEP78Q5JTW2 689 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 TMEM42Q69YG0 159 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 FAM220AQ7Z4H9 259 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 KLBQ86Z14 1044 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 SYS1Q8N2H4 156 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 SPERTQ8NA61 448 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 ZNF485Q8NCK3 441 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 OR1M1Q8NGA1 313 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 Q8TCH9 128 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 C1orf159Q96HA4 380 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 TMEM80Q96HE8 168 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 TMEM165Q9HC07 324 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 INPP5EQ9NRR6 644 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 PAK1IP1Q9NWT1 392 aaPredicted RBP11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 DIMT1Q9UNQ2 313 aaKnown RBP11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 CR1P17927 2039 aa11.94□□□□□ -0.5
SHKBP1-217ENST00000598558 LOC107986453A0A1B0GWG9 222 aa11.93□□□□□ -0.5
SHKBP1-217ENST00000598558 HEXAP06865 529 aa11.93□□□□□ -0.5
SHKBP1-217ENST00000598558 HTR1AP08908 422 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms