RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 OR51E1Q8TCB6 317 aa11.64□□□□□ -0.55
UPF1-205ENST00000598209 TMEM186Q96B77 213 aa11.64□□□□□ -0.55
UPF1-205ENST00000598209 BEX2Q9BXY8 128 aa11.64□□□□□ -0.55
UPF1-205ENST00000598209 SHARPINQ9H0F6 387 aa11.64□□□□□ -0.55
UPF1-205ENST00000598209 MOB1AQ9H8S9 216 aa11.64□□□□□ -0.55
UPF1-205ENST00000598209 G6PC2Q9NQR9 355 aa11.64□□□□□ -0.55
UPF1-205ENST00000598209 GPR84Q9NQS5 396 aa11.64□□□□□ -0.55
UPF1-205ENST00000598209 C14orf119Q9NWQ9 140 aa11.64□□□□□ -0.55
UPF1-205ENST00000598209 LPAR3Q9UBY5 353 aa11.64□□□□□ -0.55
UPF1-205ENST00000598209 OR52A1Q9UKL2 312 aa11.64□□□□□ -0.55
UPF1-205ENST00000598209 PCDHB10Q9UN67 800 aa11.64□□□□□ -0.55
UPF1-205ENST00000598209 PPIAL4EA0A075B759 164 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 METTL15A6NJ78 407 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 A6NLC8 198 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 ANXA2P2A6NMY6 339 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 PPIAL4DF5H284 164 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 PLPP2O43688 288 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 SULT1C4O75897 302 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 CST4P01036 141 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 IGLV3-1P01715 115 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 TTRP02766 147 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 PPIAL4FP0DN26 164 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 MAP2K3P46734 347 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 ZNF85Q03923 595 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 PRDX4Q13162 271 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 FAM120AOSQ5T036 256 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 ZNF684Q5T5D7 378 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 LIPNQ5VXI9 398 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 IL17RELQ6ZVW7 336 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 PACRGLQ8N7B6 248 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 PIGCQ92535 297 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 FAM71F1Q96KD3 344 aaPredicted RBP11.63□□□□□ -0.55
UPF1-205ENST00000598209 Q96MT0 163 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 PATZ1Q9HBE1 687 aaKnown RBP11.63□□□□□ -0.55
UPF1-205ENST00000598209 C8orf4Q9NR00 106 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 HIF1ANQ9NWT6 349 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 RNF7Q9UBF6 113 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 PPIAL4AQ9Y536 164 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 MPC1Q9Y5U8 109 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 SNX5Q9Y5X3 404 aa11.63□□□□□ -0.55
UPF1-205ENST00000598209 TRAV20A0A0B4J274 112 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 ZNF816-ZNF321PA0A0X1KG74 233 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 ERICH4A6NGS2 130 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 ZNF850A8MQ14 1090 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 CEACAM18A8MTB9 384 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 J3QRE1 110 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 FSTL3O95633 263 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 DBTP11182 482 aaKnown RBP11.62□□□□□ -0.55
UPF1-205ENST00000598209 ATP6V1B1P15313 513 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 HNF1AP20823 631 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 PCMT1P22061 227 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 ACTC1P68032 377 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 ACTA1P68133 377 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 IL5RAQ01344 420 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 ZNF91Q05481 1191 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 ZNF826PQ6ZT77 177 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 WDR86Q86TI4 376 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 ELMOD2Q8IZ81 293 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 ITFG2Q969R8 447 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 ITPKCQ96DU7 683 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 MICU1Q9BPX6 476 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 TMEM165Q9HC07 324 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 ABCB9Q9NP78 766 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 C1orf123Q9NWV4 160 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 SLC22A13Q9Y226 551 aa11.62□□□□□ -0.55
UPF1-205ENST00000598209 EXOGQ9Y2C4 368 aaKnown RBP11.62□□□□□ -0.55
UPF1-205ENST00000598209 hCG_1807616A0A1W2PRN6 198 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 DAPL1A0PJW8 107 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 F5H0A9 414 aaPredicted RBP11.61□□□□□ -0.55
UPF1-205ENST00000598209 FOXH1O75593 365 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 DHRS3O75911 302 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 SEC61A1P61619 476 aaKnown RBP11.61□□□□□ -0.55
UPF1-205ENST00000598209 ELF3P78545 371 aaPredicted RBP11.61□□□□□ -0.55
UPF1-205ENST00000598209 LCN2P80188 198 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 HOXA4Q00056 320 aaPredicted RBP11.61□□□□□ -0.55
UPF1-205ENST00000598209 RIPPLY1Q0D2K3 151 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 ZNF154Q13106 437 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 ZNF404Q494X3 552 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 TP53I3Q53FA7 332 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 FAM220AQ7Z4H9 259 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 THAP5Q7Z6K1 395 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 CATSPERDQ86XM0 798 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 PRIMA1Q86XR5 153 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 ZDHHC23Q8IYP9 409 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 BOLLQ8N9W6 283 aaKnown RBP11.61□□□□□ -0.55
UPF1-205ENST00000598209 C19orf18Q8NEA5 215 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 SEMA6DQ8NFY4 1073 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 OR1M1Q8NGA1 313 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 APH1BQ8WW43 257 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 CYGBQ8WWM9 190 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 OR5P3Q8WZ94 311 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 RORBQ92753 470 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 LGALS12Q96DT0 336 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 TMEM246Q9BRR3 403 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 RTL8AQ9BWD3 113 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 AMBNQ9NP70 447 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 ACOXLQ9NUZ1 547 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 GNG8Q9UK08 70 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 PCDHGB1Q9Y5G3 927 aa11.61□□□□□ -0.55
UPF1-205ENST00000598209 A0A1B0GTI1 187 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms