RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 CRLF1O75462 422 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 SRSF10O75494 262 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 RPP14O95059 124 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 CYB5R3P00387 301 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 PNPP00491 289 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 IGHV2-5P01817 119 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 GRPP07492 148 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 PPIAL4FP0DN26 164 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 DBTP11182 482 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 HNF1AP20823 631 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 DVL1P1P54792 670 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 ZNF85Q03923 595 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 SLC34A1Q06495 639 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 RAB40BQ12829 278 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 IL18R1Q13478 541 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 ZNF684Q5T5D7 378 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 ZBTB37Q5TC79 503 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 PRAMEF6Q5VXH4 476 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 LIPNQ5VXI9 398 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 SSX6Q7RTT6 188 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 GLCCI1Q86VQ1 547 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 EGFL6Q8IUX8 553 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 CCDC54Q8NEL0 328 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 PIGCQ92535 297 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 LGALS12Q96DT0 336 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 SOX7Q9BT81 388 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 ADI1Q9BV57 179 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 RTL8AQ9BWD3 113 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 G6PC2Q9NQR9 355 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 UFSP2Q9NUQ7 469 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 DCAF16Q9NXF7 216 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 GNG8Q9UK08 70 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 CDC42EP3Q9UKI2 254 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 PPIAL4AQ9Y536 164 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 ABCA1O95477 2261 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 A6NLC8 198 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 ZNF850A8MQ14 1090 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 J3QRE1 110 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 FAM20BO75063 409 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 DHRS3O75911 302 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 TTRP02766 147 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 MSMBP08118 114 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 PMELP40967 661 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 ACTA2P62736 377 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 ACTG2P63267 376 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 ZNF91Q05481 1191 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 MFGE8Q08431 387 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 PRDX4Q13162 271 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 ZMYND11Q15326 602 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 KCNJ8Q15842 424 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 KRT74Q7RTS7 529 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 FAM71F1Q96KD3 344 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 BEX2Q9BXY8 128 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 SHARPINQ9H0F6 387 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 TRIM36Q9NQ86 728 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 INPP5EQ9NRR6 644 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 C1orf123Q9NWV4 160 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 AASSQ9UDR5 926 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 ENPP5Q9UJA9 477 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 HSPE1-MOB4S4R3N1 261 aa14.54□□□□□ -0.08
SHKBP1-212ENST00000596163 C2CD3Q4AC94 2353 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 TRAV20A0A0B4J274 112 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 IRGMA1A4Y4 181 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 TMEM210A6NLX4 147 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 FAM157AC9JC47 383 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 H0YAE9 185 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 H0YHG0 523 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 IGLV3-1P01715 115 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 ACKR3P25106 362 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 MPPED2Q15777 294 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 CHRFAM7AQ494W8 412 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 CDONQ4KMG0 1287 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 TP53I3Q53FA7 332 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 ZNF691Q5VV52 312 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 DOK3Q7L591 496 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 CATSPERDQ86XM0 798 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 ZDHHC23Q8IYP9 409 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 OR1M1Q8NGA1 313 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 DVL3Q92997 716 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 PPP1R14AQ96A00 147 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 TMEM186Q96B77 213 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 PATZ1Q9HBE1 687 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 TMEM165Q9HC07 324 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 AMBNQ9NP70 447 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 MRPS18AQ9NVS2 196 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 MIOXQ9UGB7 285 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 PIGLQ9Y2B2 252 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 ZANQ9Y493 2812 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 TLN2Q9Y4G6 2542 aa14.53□□□□□ -0.08
SHKBP1-212ENST00000596163 A0A1B0GVI7 797 aa14.52□□□□□ -0.09
SHKBP1-212ENST00000596163 DHRS7CA6NNS2 312 aa14.52□□□□□ -0.09
SHKBP1-212ENST00000596163 FOXH1O75593 365 aa14.52□□□□□ -0.09
SHKBP1-212ENST00000596163 ZNF12P17014 697 aa14.52□□□□□ -0.09
SHKBP1-212ENST00000596163 HOXB4P17483 251 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-212ENST00000596163 ADARB1P78563 741 aaKnown RBP14.52□□□□□ -0.09
SHKBP1-212ENST00000596163 OR5P3Q8WZ94 311 aa14.52□□□□□ -0.09
SHKBP1-212ENST00000596163 RORBQ92753 470 aa14.52□□□□□ -0.09
SHKBP1-212ENST00000596163 ITPKCQ96DU7 683 aa14.52□□□□□ -0.09
SHKBP1-212ENST00000596163 RNF170Q96K19 258 aa14.52□□□□□ -0.09
SHKBP1-212ENST00000596163 RNPEPL1Q9HAU8 725 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms