RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 OPN3Q9H1Y3 402 aaPredicted RBP11.5□□□□□ -0.57
VRK3-205ENST00000593919 SLC17A5Q9NRA2 495 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 STEAP1Q9UHE8 339 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 SH3BGRL2Q9UJC5 107 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 DHDHQ9UQ10 334 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 C5orf63A6NC05 138 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 E9PLN8 166 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 GSTT2P0CG29 244 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 GSTT2BP0CG30 244 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 SFTPCP11686 197 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 CEACAM8P31997 349 aaPredicted RBP11.5□□□□□ -0.57
VRK3-205ENST00000593919 PTH2RP49190 550 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 KRTAP27-1Q3LI81 207 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 ZNF610Q8N9Z0 462 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 OR51E1Q8TCB6 317 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 HAVCR1Q96D42 359 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 RNF170Q96K19 258 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 NKX3-1Q99801 234 aaPredicted RBP11.5□□□□□ -0.57
VRK3-205ENST00000593919 CACNG6Q9BXT2 260 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 RABL2AQ9UBK7 228 aaPredicted RBP11.5□□□□□ -0.57
VRK3-205ENST00000593919 RABL2BQ9UNT1 228 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 NUBP2Q9Y5Y2 271 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 ETV7Q9Y603 341 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 CACNA1BQ00975 2339 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 ADGRG4Q8IZF6 3080 aa11.49□□□□□ -0.57
VRK3-205ENST00000593919 IGSF10Q6WRI0 2623 aa11.49□□□□□ -0.57
VRK3-205ENST00000593919 A0A0A6YYJ9 748 aa11.49□□□□□ -0.57
VRK3-205ENST00000593919 GABARAPH6UMI1 98 aa11.49□□□□□ -0.57
VRK3-205ENST00000593919 ERVH48-1M5A8F1 160 aa11.49□□□□□ -0.57
VRK3-205ENST00000593919 DHFRP00374 187 aa11.49□□□□□ -0.57
VRK3-205ENST00000593919 APOC1P02654 83 aa11.49□□□□□ -0.57
VRK3-205ENST00000593919 RAB1AP62820 205 aa11.49□□□□□ -0.57
VRK3-205ENST00000593919 RBPJQ06330 500 aa11.49□□□□□ -0.57
VRK3-205ENST00000593919 SNTB2Q13425 540 aaKnown RBP11.49□□□□□ -0.57
VRK3-205ENST00000593919 TSC22D1Q15714 1073 aa11.49□□□□□ -0.57
VRK3-205ENST00000593919 PCSK4Q6UW60 755 aa11.49□□□□□ -0.57
VRK3-205ENST00000593919 LUZP2Q86TE4 346 aa11.49□□□□□ -0.57
VRK3-205ENST00000593919 OR13C3Q8NGS6 347 aa11.49□□□□□ -0.57
VRK3-205ENST00000593919 THRSPQ92748 146 aa11.49□□□□□ -0.57
VRK3-205ENST00000593919 PGAM5Q96HS1 289 aa11.49□□□□□ -0.57
VRK3-205ENST00000593919 KCNK15Q9H427 330 aa11.49□□□□□ -0.57
VRK3-205ENST00000593919 BOLA1Q9Y3E2 137 aa11.49□□□□□ -0.57
VRK3-205ENST00000593919 CIB4A0PJX0 185 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 SYT7O43581 403 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 ATF4P18848 351 aaPredicted RBP11.48□□□□□ -0.57
VRK3-205ENST00000593919 ARR3P36575 388 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 TAS2R20P59543 309 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 PMPCAQ10713 525 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 DYRK1AQ13627 763 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 GSG1Q2KHT4 349 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 GFOD2Q3B7J2 385 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 SNAI3Q3KNW1 292 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 DRAM2Q6UX65 266 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 COMMD2Q86X83 199 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 TCTE3Q8IZS6 198 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 OR51D1Q8NGF3 324 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 FCAMRQ8WWV6 532 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 C7orf50Q9BRJ6 194 aaKnown RBP11.48□□□□□ -0.57
VRK3-205ENST00000593919 SOX7Q9BT81 388 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 SFXN3Q9BWM7 321 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 PLEKHA1Q9HB21 404 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 GPR84Q9NQS5 396 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 PLSCR3Q9NRY6 295 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 ING3Q9NXR8 418 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 B3GNT2Q9NY97 397 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 ATPIF1Q9UII2 106 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 HEATR1Q9H583 2144 aaKnown RBP11.48□□□□□ -0.57
VRK3-205ENST00000593919 LOC100509620A0A075B734 347 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 A0A1B0GTI1 187 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 LMX1BO60663 402 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 CD2P06729 351 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 RAB11BQ15907 218 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 GABRA6Q16445 453 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 ASPHD2Q6ICH7 369 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 ZNF584Q8IVC4 421 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 PLPP7Q8NBV4 271 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 NANOS1Q8WY41 292 aaKnown RBP11.48□□□□□ -0.57
VRK3-205ENST00000593919 TAS2R4Q9NYW5 299 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 KLK11Q9UBX7 282 aa11.48□□□□□ -0.57
VRK3-205ENST00000593919 DIDO1Q9BTC0 2240 aaKnown RBP11.48□□□□□ -0.57
VRK3-205ENST00000593919 ARPC4-TTLL3A0A0A6YYG9 625 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 A0A0U1RQV5 110 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 A0A1B0GVI7 797 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 A0A1W2PR80 420 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 SMLR1H3BR10 107 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 SULT1B1O43704 296 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 EFNB2P52799 333 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 TMEM95Q3KNT9 176 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 SFRP4Q6FHJ7 346 aaPredicted RBP11.47□□□□□ -0.57
VRK3-205ENST00000593919 BEND4Q6ZU67 534 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 DPPA2Q7Z7J5 298 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 MDP1Q86V88 176 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 CXorf67Q86X51 503 aaPredicted RBP11.47□□□□□ -0.57
VRK3-205ENST00000593919 DACT3Q96B18 629 aaPredicted RBP11.47□□□□□ -0.57
VRK3-205ENST00000593919 MED28Q9H204 178 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 HRASLSQ9HDD0 168 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 COPZ2Q9P299 210 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 CKLFQ9UBR5 152 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 A0A0G2JNJ9 132 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 GMDSO60547 372 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms